Brassica rapa (field mustard): 103829279
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Entry
103829279 CDS
T03449
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103829279
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
103829279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
103829279
NCBI-ProteinID:
XP_009103186
LinkDB
All DBs
Position
A07:complement(13002550..13010207)
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AA seq
1551 aa
AA seq
DB search
MDQSQQRTVTAPSSSRSYQFHPARAKIIDLFNLYLGRGSRQKPDEPARDPPPNKSQKRVH
APSRDFPPGNEQFIVDFEQLHTQFNDPDQLRAITESVSVTMVLQCSNHAPRAEFLLFALR
ALFRIGFVNWDTFLPSLLSSVSAAESSLNQAASSSATSSQSLAPVGIGSPGNEQASLTPL
AMRSSQRVRAAAVNSLRQISCKIILIGVEFNLKPVTHAEIFQHMMSWLVSWDMREMGTEK
SLSEWLRSCLEVIWLLVDEGQSRIPFYELLRSGLQFIENIPDGDEALFTLVMEIHRRRDA
MAMHMLMLDQHLHCPTFGTHRISSQTPVNVSAEAVAHLRYSPITYPSVLGEPLCGEDLAM
SIPQGGLDWERAVRCIRHAIRTTPSPDWWKRVLVVSPGYRPSAQAGPIPGAVFTSDMICE
AIIDRIVELLKLTNSDANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGDDNHIL
RTNHVTWLLAQIIRVELVMTALNSDLKKVETTRKILSFHREDRTDPNNPQSVLLDFVSSC
QNLRIWSLSATTRAYLNNDQLLKGKQIDEWWRSKGERMMDYMNLDDRSIGMFWVVSYTMA
QPACETVINWLSSSGMAELPGLQPNERVMMMQEVTPLPMSLLSGFSMNLCLKLALQMEEA
LFVSQVVPSIAMVETYTRLLLISPHSMFRSHFTQLAQRNASLLSKPGVTLLVLEILNYRL
LPLYRYQGKSKTLMYDVTKIISALKAKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKG
PTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQHTWSEKTLRHFPSL
LRDALSGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPSYVMTYLSHSFPQHRQYLCA
GACMLMQGHPDNVNSANLARVLREVSPEEVTANIYTLVDVLLHKFHVDLQRGHNIKEILD
KHDANLAFFFWTHEMLPLDIFILALIDRDDDPHALIIAKIILERPELMQRINMYCANRGP
PEHWLFTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVVYRLIENNAMDTA
DKILTAYSHFLAYHPLRFTFVRDILAYFYGHLPGQLVVKILRVLGLSKIPFSESFPQYIS
NPSSPTCPPLDYFATLLLNLVNNVIPPLSSSSSNCSSRSGSMADMLNSSSARSLHGKTPG
ASQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQS
TLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCMNTASFVSRSGYTCQQLSC
LLIQACGLLLAQLPPDFHTQLYMEASRVVRETWWLTDGKRSQGELDSAVGYALMDPTWAA
QDNTSTAIGNIVALLHAFFSNLPQEWLEGTHLIIKNLRPVTSVAMLRVVFRIMGPLLPRL
ANTHALFNKTLALLLSTMVDVFGKNSQTQVPVEASQIADLIDFLHHVVHYEGQGGAVQSS
SKPRPDILALIGRAADSLRPDVQHLLSHLRTDPNTSIYAAAHQNTAKTNTS
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcgcagcagcgcacagtcacagctccttcatcctctagatcgtaccagttc
catcctgctcgtgccaagatcatcgacctcttcaatctctacttagggagaggaagccgg
caaaagccagacgagcctgcacgagatcctcctccgaacaagtcccagaagcgtgttcat
gctcccagtagagacttccctcctggaaacgagcagttcattgtggacttcgagcagctt
cacacccaattcaatgatcctgatcagttgagagcaatcacagagtcagtttcagtaact
atggtgttgcagtgtagcaaccacgcacctagagctgagttccttctcttcgccttgcgt
gcattgtttagaatcggtttcgttaactgggataccttcttaccttcccttctctcctcg
gtctccgctgctgagtcctcactaaaccaagctgcttcttcttcagctacttcttcacag
tctttagctcctgtaggtattggttctccagggaacgaacaagcttctctaactcctttg
gctatgagaagcagtcaacgcgtaagagctgcagcggttaacagtctgcgtcagatcagt
tgcaagatcatcttgatcggcgttgagttcaacctcaaaccggtaactcacgccgagatc
ttccagcacatgatgagctggcttgtgagctgggacatgagggagatggggaccgagaag
agtttatctgagtggttgaggagctgtttggaagttatatggctgttggtggacgagggt
caatcccggattccgttttacgagctgctccgcagcggtctgcagtttatagagaacata
cctgatggtgatgaagccttgttcactcttgtcatggagatacacaggaggagggatgct
atggctatgcacatgctcatgttggaccagcatcttcactgtccgacgtttggtactcat
cgcatatcgtctcagacgcctgtcaatgtctctgctgaagctgtggcgcatcttcgctac
tcgcctattacgtatccgagtgtgcttggggagcctttgtgtggagaggatctggccatg
tctattccacaaggaggcttggattgggagagagcggtgcgttgcattagacatgctatt
cgcaccacgccgtctccggattggtggaagcgtgttcttgttgtgtctccaggttataga
ccttctgcgcaagcagggcctatccctggtgctgtgttcacctctgacatgatttgtgag
gcgatcattgacaggattgttgagcttctcaagctaaccaactcagatgcaaattgctgg
caagagtggcttgttttctcagatatattcttctttctaatcaaaagtgggtgtactgat
tttgttgattttattgacaagttggtcttacgacttaacggtgatgataaccatattctt
cgaacgaatcacgtgacgtggttgcttgctcaaataatacgcgttgagcttgtgatgact
gctttgaactccgatcttaaaaaggtggagacgactaggaagatcttatcatttcacagg
gaagacagaactgatcccaataatcctcagagtgtgttgcttgacttcgtaagcagttgt
cagaatctacggatttggtcactaagcgcaacaactagagcctacctaaacaatgaccaa
ctcttgaaggggaaacagattgatgagtggtggagaagcaaaggagagcgcatgatggat
tatatgaatttggatgataggtccatcggcatgttttgggttgtttcctataccatggca
caaccggcttgtgaaacagttataaactggttgtcttcatctggaatggctgagttacct
ggattacaaccaaacgaaagagtaatgatgatgcaggaagtgaccccattaccaatgtca
ttgctatctggcttttcaatgaacttgtgcttgaaactggctcttcagatggaagaagct
ttgtttgtcagccaggttgttcctagcattgcaatggttgagacatacacaagattgctt
ctcatttcccctcactctatgttccgttcgcatttcactcaattggcacagagaaatgct
tctctgctgagcaaacctggggtgactttgcttgttcttgagattctgaactaccgtttg
cttcctctatacagataccaaggaaaaagcaaaaccttaatgtatgatgtcaccaaaata
atctctgcactgaaagcaaaacgtggcgaccaccgtatattcagactagccgaaaactta
tgcatgaatctcattttatcactcagagacttcttctctgtgaaacgtgagggcaaaggg
ccaactgagttcactgagacgttgaaccgaataacaatcatgacactagccatcacaatc
aaaacacgcggtatcgcggatgctgatcacttggtttatctgcaaaccatgttggagcag
atactcgcgacgagtcagcatacgtggtcagagaagactctgcgtcatttcccgtctctt
ctccgtgacgctttgagtgggcgggtagacaagagagggttgtcgattcaggcgtggcaa
caggcggagacgactgtgataaaccagtgcactcagcttctttcaccgtctgctgaacct
tcttatgttatgacgtacctcagccacagttttcctcagcaccgtcagtatctatgcgct
ggtgcttgtatgctcatgcaaggccaccctgataacgtcaacagcgctaatctggcacgg
gttctgagagaggtttcacctgaagaagtcactgctaacatatacactttggtagatgtt
ttgcttcacaaatttcatgttgaccttcagcgtggacacaatataaaggagattctagac
aagcatgacgcaaatcttgcgtttttcttctggacacatgaaatgcttcctcttgacata
tttattctggccctcattgaccgtgatgatgatccgcacgccttgataattgcaaaaatt
atacttgaaaggccagagcttatgcagaggattaacatgtattgcgcaaaccgtgggcct
cctgagcactggcttttcacgcaggtgttcaaacgcaatgaactccagaaggcccttggt
aaccatctttcttggaaagacaggtatccgacgttctttgatgacattgcagcgcgtttg
cttccagtgatccctctagtggtgtacaggctcatcgagaacaatgcaatggatacagct
gacaaaattttgactgcatactctcattttctggcttatcatcctctcagattcacgttt
gtacgcgatatcctcgcttatttctacggtcatcttccggggcaacttgttgttaagatc
ctcagagtccttggtctcagcaagattccattctctgaatcgttccctcagtacatcagc
aacccgagttccccaacatgcccgcctcttgattacttcgccactcttttgctgaatctc
gtaaacaacgttatacctccacttagcagcagcagcagcaactgcagctcaaggtctggc
tcaatggcagacatgttaaacagctcctcagcgagatctcttcatggaaaaactccagga
gcatctcagcccggaccagctaacgcctctgagggacagaaagcattctaccagatccaa
gaccctggaacttacactcaactcgttcttgaaacggctgtgattgagatcctctcgctt
cctgtctccgctgctcagattgtctcttcgcttgttcagataatcgtcaacatacagtcc
acacttattcaatctggcaacggcttccacggcgctgcaaacggagtggggcaaggttct
gtactgcctacgtctccctcaggagggagcacggactcaatgagcgcaagcaggtccact
tgtatgaacacagcgagctttgtctctagaagcggttatacatgtcagcaactgtcgtgt
ctgttgattcaagcttgtgggcttctgcttgctcagctccctccagattttcacacgcag
ctttacatggaggcttcacgtgtggtaagggaaacgtggtggctgactgatgggaagaga
tcgcaaggtgaactagactctgctgttgggtatgctttgatggatcctacatgggctgct
caggacaacacctcaaccgccatagggaatatagtggccttgcttcatgctttcttcagc
aatctcccacaagaatggcttgaaggcacgcatctcattatcaagaacctccggcctgtg
acatctgtggcaatgctcagagttgtattccgtattatgggaccgcttctcccgaggctt
gcaaacacacatgcgctctttaacaagacgctagcccttctcttgagcacaatggttgat
gttttcgggaaaaactcacagacacaggtccctgttgaagcatcccagattgcagatctt
atcgatttccttcaccatgttgttcactacgagggacaaggaggagcagttcaaagtagc
agcaagccgagaccagatatattggccttaatcggaagagcagcagattctctccgacca
gatgtacaacaccttctctctcacctcagaactgatcccaatacgtcgatatatgctgct
gctcatcagaataccgcaaagaccaacacctcttag
DBGET
integrated database retrieval system
