Brassica rapa (field mustard): 103829430
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Entry
103829430 CDS
T03449
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103829430
Enzymes [BR:
brp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103829430
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103829430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
103829430
NCBI-ProteinID:
XP_033131306
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Position
A07:14038244..14043741
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AA seq
511 aa
AA seq
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MSDETKPASGDSSGLLNGLLTGGAEKPQRVNEAARSLDPSAVKDLLSLGVCERCILRLIT
VATFDSDLATVSSSTLRGWLGSGEEEAASPEMSICIVCLGVLQFVFSDDKQTLVKMKSDC
GSGHAAWITDLVKQQGHEFDSFCLEVSLPSTISENERAVLLYLKGKYSNEAWLQSEKVSV
KDALKVLVLDPLRASLSLQGAKSDSSSFHIRLTYSKASDDAQGLSETTHERKKRKTDVVY
ADEENGSSCISENPFEKVYEPCILSVHCNQMPIFFSGRYFKYSRNVSQSRWIIDDERMGE
ASVEEIIGGSILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRKCPSQQSLTEI
EEKINNSEKKLVGVKDLKFIGSECWAMMREGEAEKQKQYAALVWISRPLEEEDCNSISSM
IELKILQKTPIRVLHRRSPLERERTIHWMKLEKIKGNTHYFLLHLCTQAGTYIKEFVHGD
LGRTTPSMGSILGCRAEIIQLDVTDVKMGDS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaacaaaacccgcgtccggcgactcatccggtttgctcaacggcctccta
accggtggagccgaaaaaccacagagagtcaacgaagcagctcgatctctagatcccagt
gctgtgaaagatctgctatctctcggggtctgcgagagatgtattctccgattaataacc
gtcgcgactttcgattccgatttggcgacagtgtcgtcatcaactcttcggggctggcta
ggctctggagaagaggaagctgcgtcaccggagatgagcatctgcattgtttgtttaggt
gtattgcagttcgttttctccgatgacaaacaaacgctggtgaaaatgaaatcggattgt
ggtagtggtcacgccgcatggatcacggacttggtgaagcagcaaggtcatgagttcgat
tccttctgtctcgaagtctctttgccttccactatctcggagaatgagcgtgcagtcttg
ttataccttaaaggaaagtatagcaacgaagcttggctgcagagtgaaaaagtttctgtg
aaggatgctttgaaagttctagtcttggatccacttagagcatctttgtctttgcagggg
gctaaatctgattcaagctcttttcacatccgtttgacatactccaaggcatctgatgac
gctcaaggcttgtctgagacaacgcatgagagaaagaagaggaaaacagatgttgtttat
gcagacgaagagaacggatctagctgtatctccgagaatccatttgaaaaggtttatgaa
ccatgcatcttgtcagttcattgcaaccagatgcctatctttttcagtggcagatacttt
aagtactccagaaatgtaagtcaatcccgatggattattgatgatgaaagaatgggtgaa
gcgtcggttgaggagataattggtggaagtattcttccagcatgcctcggggattcctac
aagttccatgctgctggcagagaagatattgatgtacggatgttgggttcaggtagacct
ttcttaatcgaggttcagaactcccgcaaatgtccatctcagcaatcgttgacggaaatt
gaagaaaagataaacaactcagagaaaaaactagttggagttaaagatcttaaattcatt
ggaagtgagtgttgggcaatgatgcgtgaaggagaagcagagaaacagaagcaatatgct
gcacttgtatggatttctcgtccacttgaagaggaagattgcaactcaatttcttccatg
atagaattgaaaattttgcagaagacaccaataagagtgcttcaccgacgaagtccactg
gaacgtgaaaggactatacactggatgaaacttgaaaagataaaaggaaacactcactac
tttctattgcatctatgcacccaggctggaacatacatcaaagagtttgttcatggagat
cttggtcgtactactcccagcatgggatcaattttaggttgcagggcggagataatacaa
ctagatgtgactgatgtgaaaatgggcgattcttga
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