Brassica rapa (field mustard): 103829700
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Entry
103829700 CDS
T03449
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103829700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103829700
03110 Chaperones and folding catalysts [BR:
brp03110
]
103829700
03029 Mitochondrial biogenesis [BR:
brp03029
]
103829700
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103829700
Enzymes [BR:
brp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103829700
Messenger RNA biogenesis [BR:
brp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103829700
Chaperones and folding catalysts [BR:
brp03110
]
Heat shock proteins
HSP60 / Chaperonin
103829700
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103829700
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103829700
Exosomal proteins of other body fluids (saliva and urine)
103829700
Exosomal proteins of breast cancer cells
103829700
Exosomal proteins of colorectal cancer cells
103829700
Exosomal proteins of bladder cancer cells
103829700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Ribosomal_L29
Motif
Other DBs
NCBI-GeneID:
103829700
NCBI-ProteinID:
XP_009103638
UniProt:
A0A397YKM1
M4D677
LinkDB
All DBs
Position
A07:15696806..15699362
Genome browser
AA seq
585 aa
AA seq
DB search
MATANALSSPSVLCSSRQGKLSGGSQQKGQRVSYRKANRRFSVRANVKEIAFDQSSRAAL
QAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARP
VKGGSDIKAVATISAGNDELIGAMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLLVEFENARVLITDQKITAIKDIIPILEKTTQLRAPLLIIAEDVTGE
ALATLVVNKLRGVLNVVAVKAPGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIDQL
GIARKVTISKDSTTLIADAASKDELQARISQLKKELFETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDAD
ERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWELGYNAMTDTYENLLEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPAAAAPEGLMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcaaacgctctctcctccccctctgtcctctgctcttcacgacagggaaag
ctgagtggtggaagtcagcagaaaggtcaaagagtaagctacaggaaagctaacagacgc
ttcagcgttagagcaaatgtaaaggagattgctttcgaccagagctcaagagctgctctt
caagctggtatcgacaagcttgctgatgctgttggtctcactcttggccctagagggagg
aatgttgtgttggatgagtttggtagccccaaggttgtgaacgatggagtcaccatcgct
agagccattgagttacctgacgccatggagaacgctggtgcagcactcatccgtgaggtt
gcgagtaagactaatgactctgctggcgacgggacaacaactgcttccgtcctggctcgg
gaaatcatcaaacacggtctgttgagcgtcacttccggcgccaatcctgtctccctcaag
agaggaatcgacaagaccgttcaagctttgatagaagagcttgagaagagagctagacct
gtcaaaggcggtagtgacatcaaagccgtggctacaatctcagctggaaacgatgagctt
attggagcgatgatcgctgacgccattgacaaagtgggacctgatggtgttctctccatt
gagtcctcatcctcctttgagaccaccgtcgaagtcgaagaagggatggagattgacaga
ggctacatctcgcctcagttcgttaccaaccccgagaagctactcgtcgagttcgagaac
gcgagggtgttgatcactgaccagaagatcactgccatcaaagacatcatcccaatcttg
gagaagaccactcagcttcgagctccgttgctgatcatcgctgaggatgtcacaggcgag
gccttagcaactctggttgtgaacaaactccgcggtgttctcaacgttgttgctgttaaa
gctccagggttcggagaaaggagaaaagctatgcttcaggatatagctatcttgactgga
gctgagtaccaggcccttgacatgggccttctggtcgagaacacgaccatagatcagttg
gggattgctagaaaagttactatcagcaaagactcgaccacgcttatagccgacgcagct
tccaaggacgagctgcaagctcgtatctcccagctgaagaaggagctcttcgagactgac
tctgtgtatgactcggagaagctcgctgagaggattgctaagctctctggtggtgttgcc
gtcattaaagtcggagcagcgactgagaccgagctcgaggaccgtaagcttcgtattgag
gatgcaaagaacgccacgttcgctgctatcgaggaaggaatagttcccggtggtggtgcc
acgttggtgcatctctccactgtgattcccgccattaaggagacgtttgaggacgctgat
gaacgtttgggagctgatatagtacagaaggctttggtggcaccagctgcattgattgcg
cagaacgctggaatcgaaggggaagttgtggtggagaagattatgttcagtgaatgggag
ctagggtacaacgccatgactgatacctatgagaatctgttggaagcaggagtgattgat
ccagctaaagtgacgagatgtgcgctgcagaacgctgcttcggttgcagggatggtgctg
accactcaggccattgttgttgacaaacctaaacccaaggctcctgctgctgctgcacct
gagggcctcatggtgtaa
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