Brassica rapa (field mustard): 103829721
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Entry
103829721 CDS
T03449
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 15 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103829721
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103829721
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103829721
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
103829721
NCBI-ProteinID:
XP_009103668
UniProt:
M4D655
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Position
A07:15842094..15858155
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AA seq
684 aa
AA seq
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MGYGNSRSVRFEEDSEVTKPQAVHEETAVKLKFKINGAQISPRKNVKKMTRGKSFKDKVL
SRVFTEDLGRVKNKILDPRGQTIRKWNKLFLIACLVSLFVDPLFFFLPVMRKEACITIGI
RLEVVLTVIRSLADAFYIAQIVIRFRTAYIAPSSRVFGRGELVIDSRKIAWRYLNKSFWI
HLVAALPLPQVLIWIVIPNLRGSPMTNTKNTLRFIIIFQYVPRMFLIFPLSRQIIKATGV
VTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKPICQYRFFECRRL
EDPQRNSWFEWSNITTICKPGTRFYEFGIYGDAVTSTVTSSNFISKYFYCLWWGLKNLSS
LGQNLSTSTYVGEIIFAVVMATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWM
HHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFD
QMDERMLDAISERLKPALFTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCL
IGPGDFCGEELLTWALDPRPVVILPSSTRTVKAIYEVEAFALRADDLKFVATQFRRLHSK
QLKHKFRFYSHQWRTWAACFIQAAWRRHKKRKYATELRVKEEFQCMFETASMVRLNSGKF
TRSGSDSGMVSSIQKPVEPDFSSE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggtaactcaagatctgtgagatttgaagaagattcagaagtaacaaagcca
caagctgtacatgaagaaactgcggtaaagctcaagttcaaaatcaatggagctcaaatc
tctcctagaaaaaatgtaaagaagatgactagagggaagtcttttaaagataaagtactc
tccagagtgttcactgaggatcttgggagagttaaaaacaaaatcctcgatcctcgtgga
cagacaataagaaaatggaacaaactctttctcatagcatgtttggtttctctgttcgtg
gatcctctgtttttcttcttaccggtcatgagaaaagaggcttgtatcaccattggaatc
agactcgaagttgttctcacagttattagatctttggctgatgctttctacatcgctcag
attgttatacggtttagaacggcttacatcgccccttcttctcgtgtattcggtagagga
gagcttgtgattgattcaagaaagattgcttggaggtatctcaacaaaagcttctggatt
catttggttgctgctttgcctttacctcaggtgttgatttggatcgtaataccaaatcta
agaggctcaccaatgacaaacaccaagaacactcttagattcatcatcatattccagtat
gttccaaggatgttccttatattccctctctctcgccagatcattaaagccactggtgtt
gtaactgagactgcttgggcaggagccgcctacaacctcatgctatatatgctagcaagc
catgttttaggtgcttgttggtacttgcttgcagttgagaggcaagaggcttgctggaga
catgcttgcaacatcgagaaaccgatttgtcaatacagattcttcgagtgcagaaggctt
gaagatcctcaaaggaactcttggttcgaatggagcaacataacaactatatgcaaacct
ggaactaggttttacgagttcggtatatacggagatgcagtaacttcaactgttacttca
tcaaacttcataagcaagtacttctactgtctctggtggggactgaagaacctcagttcc
ttgggacaaaatctatccacgagcacttacgttggtgagattatcttcgctgttgtcatg
gcgactctagggcttgtcctctttgcattgcttattggaaatatgcaaacatatttacag
tcgacaaccatgagacttgaagaatggaggataaggaggacagatacagagcaatggatg
caccataggcagcttcctccagagctaagacaagccgtgagaaaatatgatcaatacaag
tggttagccacaagaggagtcgatgaagaagctttattgataagtcttcctcttgatctc
cgaagagatatcaaacgccatctatgttttgatcttgttcgacgtgttccgctgttcgat
caaatggacgaaagaatgcttgacgcgatcagcgagaggctaaaaccggcattattcact
gaaggtacgtttcttgtgagagaaggcgacccggtcaatgaaatgctcttcataatcaga
ggccatcttgattcttacacaacaaatggaggcagaaccgggttcttcaactcttgtctc
ataggaccaggagatttttgcggtgaggagttgcttacctgggcgttagatccacgtccg
gttgtgatcttaccgtcttccacacgcaccgtcaaagccatttacgaagttgaagcgttt
gctttgagagctgatgatttgaagttcgtggctacacagtttaggagattacatagtaag
cagttgaaacataagtttaggttttactctcatcaatggagaacttgggcggcttgtttc
atacaggctgcttggagacggcacaagaagaggaagtatgcgactgagctgagggttaaa
gaggagtttcaatgtatgtttgagacggcctcgatggttaggctaaacagtgggaagttt
actcgtagtgggtcggattctggtatggtatcttcgattcagaaaccagtagaaccggat
ttttctagtgaatga
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