Brassica rapa (field mustard): 103829722
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Entry
103829722 CDS
T03449
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103829722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103829722
Spliceosome [BR:
brp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103829722
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
103829722
NCBI-ProteinID:
XP_009103670
UniProt:
M4ERU5
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Position
A01:18337730..18340298
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AA seq
486 aa
AA seq
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MATLEDSFLADLDDLSDNEAELDESDGDDAKKDEEDIDMDMADLETLNYDDLDSVSKLQK
SQRYLDIMQKVEEALGKESDGTEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRD
KYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTALTTKGSP
LPEDVLQKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQVLGHKRKNLAGFSSATSQLRVGYLEQTEIFQSTPPALKSRAGRILAAK
STLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRR
LRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKI
NPTIAKKLKERNYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF
SKLKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttcctcgcagaccttgacgacttatctgacaatgaagca
gaactggatgagtctgatggtgatgatgcgaaaaaggatgaagaagatatcgacatggac
atggctgacttagaaacccttaactacgatgatctcgattccgtttctaagctccagaaa
tctcagagataccttgacattatgcagaaagtggaagaggctcttggaaaggaatctgat
ggaacggagaaaggaactgtgctagaagacgatcctgaatacaagctaatcgtggattgc
aaccagctctcggttgacattgagaacgagattgccatcgtccacaacttcatccgtgac
aagtacagactcaagtttcaagagcttgaatctctggtaaaccaccctattgactacgcc
cgcgttgtcaaaaagataggcaatgagacggatttaactctcgttgatcttgaaggcctt
cttccatctgctattatcatggttgtttcagtcactgccttgaccaccaaagggagccca
ctcccggaggatgtcctgcagaagactctagaggcttgtgatcgagctttagatcttgat
tccgctaggaagaaggttcttgactttgtcgaaagcaagatggggtctattgcaccgaat
ctttctgctattgtcgggagtgctgttgcagccaagctcatgggaactgctggaggtttg
tcggcgcttgctaaaatgcctgcctgtaatgtacaagttcttggccacaagaggaagaac
cttgccgggttctctagtgcaacgtcacagttacgtgtggggtatctggagcagacggag
attttccagagcacgcctcccgcgcttaagagtcgcgctggcaggatcttggctgcaaaa
tctactttggcggcgagagttgatgctactagaggagacccgtcgggaacgaatgggaaa
gctttgagggaagagatccgtaagaagattgagaagtggcaagaacctcctcccgcaagg
cagcctaaaccgcttcccgttcctgattccgagcctaaaaaaagaagaggtggtcgccgt
ttaaggaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatg
gcctttggtacacccgaagagagctctcttggtgatgggttaggtgaaggatacgggatg
cttggccaggctgggagcaacaggctgcgtatatccagtgttcccagcaagctcaagatt
aatcctaccatcgccaaaaagctgaaagaaagaaactatgcaggtggtgccactacctct
ggattgacatcgagtctggcttttactcctgtgcagggaatagagctgtgcaatcctcaa
caggctttagggttaggcagtgggactcaaagcacttacttttcagagtcagggaccttc
tctaagctcaagaagatataa
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