Brassica rapa (field mustard): 103829776
Help
Entry
103829776 CDS
T03449
Name
(RefSeq) cyclic nucleotide-gated ion channel 11
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103829776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103829776
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103829776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Transgly
Motif
Other DBs
NCBI-GeneID:
103829776
NCBI-ProteinID:
XP_009103724
UniProt:
A0A398APW9
LinkDB
All DBs
Position
A01:18383417..18406631
Genome browser
AA seq
647 aa
AA seq
DB search
MRFHRLISEQSVASTSVRGRLKKIYKNMKTLNTRKIVLLVCLVALAIDPLFLFIPVIDSH
RLCFTYDKKLVATACVFRTLIDTFYGIHIIFHFITKHIAPRSQVSFRGETTVYSVAISER
HLIFYFIVDIVSVLPIPQIMVLSLIKRSDSLVSKKILKYTILSQYIPRSIRIYPLFKEVS
RSCGTVAETKWIGASLNLFLYMLQSYVFGAFWYLSAIEKKNRCWSDACAKSSMCNLTNLD
LYCVRGGGDNSHFLKISCPLIDPGEITNSTVFNFGMYIDALKSGVVESRDFPRKFFYCFW
WGLRNLSALGQNLETSNSVGEIFFAITICVSGLLLFSVLIGNVQKYLQSTIVRINEMEEK
RRDTEKWMSYRMLPESLKERIRKSEDHKWRETRGTKEESFLRGLPKNLRLEIERQIYQKL
LKHMPWFEDMDDRLLDSVCARLKTVIYTEDSYIVDEGEQIENMLFINRGTVIVTEKKTTF
FRSVGEFCGEELLSWALLDPHSSCVPISSMIIKARTEVEGFVLSADDLKFVAAQYCRLHR
KKARHISRLHSRKWRNWAACFIQAAWTEYCRRKLSKDLGEEEAKLHSTIQKDDSAGNTHN
LGGTAFASRLASTVLRNLRVNASRKDRVRQISLPEKPVDPKFPMDEI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagatttcaccgtctgatttcggagcaatccgtagcctctacatcagtcagaggacgt
ttaaagaagatttacaaaaacatgaaaacccttaacacgaggaagattgttctgctagtt
tgcttggtggcattggctattgatcctttgtttctctttatccctgttattgattctcat
agactctgcttcacttacgacaagaaacttgttgcaacagcttgtgtttttcgtaccttg
attgacacattctatgggatacacataattttccattttataaccaagcatattgctcct
cgttctcaagtatcatttagaggtgagacaaccgtgtattctgtggctataagcgaaaga
cacctcatattttacttcatcgttgacattgtttctgttctccctattcctcagattatg
gttctcagtctcattaaacggtctgactcgctagtgtcaaaaaaaatactgaaatatact
atactttctcaatatataccaagaagcattcgtatctatccgcttttcaaagaagtgtca
agatcatgtggtacggtagcagaaacaaagtggattggggcttctttaaacctttttctc
tacatgttgcaaagttatgtgtttggggctttctggtacttgagtgcaatagagaagaaa
aacagatgctggtctgatgcgtgtgctaagtcatctatgtgcaatctcacgaatttggac
ctgtattgtgtgcgcggtggcggagacaacagtcattttctgaaaatttcatgcccgtta
atagaccctggagagattacaaattccacagttttcaactttggtatgtacattgatgca
ttgaaatctggggtggtagaatcaagggattttccgaggaagttcttttattgtttttgg
tggggtctccgaaatcttagtgctttggggcaaaacttagagacaagcaactctgtaggg
gagatcttttttgctatcaccatctgcgtctctggtttactcttgttttctgtgctcatt
ggaaatgtccagaagtatctgcaatcaactatagttagaataaatgaaatggaggagaaa
aggagagatacagaaaaatggatgtcctatcggatgctgcctgagtctcttaaggaacgc
attaggaaatcagaggatcacaaatggcgagaaaccagaggcaccaaagaagaatctttt
cttcgagggcttccaaaaaaccttagactcgaaatcgaacgccaaatttaccagaagctg
ttaaagcatatgccttggtttgaagatatggatgatcgcttactagacagtgtatgcgct
cgtctcaaaacggttatttacacagaagacagttacattgttgacgaaggtgaacaaatc
gagaatatgttgttcataaatagaggaactgtaatagtgacggaaaaaaaaactacattc
tttcgctctgttggtgaattctgcggagaagaacttctcagttgggcattattggatcct
cacagttcttgtgtccccatctccagtatgatcattaaagcccggacagaagtcgaaggc
tttgttctgtcagctgatgatctcaagtttgtcgctgctcagtattgtcgcctccataga
aagaaagccagacacatatccaggttacattcgaggaaatggaggaattgggcagcatgc
tttatacaggcagcatggacggaatattgtagaaggaagctctcaaaagatttaggtgaa
gaagaagccaaactacatagcaccattcagaaagatgactcagcaggcaatacacacaac
ttaggtgggacggcttttgcgtcaagattagcttctactgttctgagaaatctacgggtg
aatgcctcacgtaaggatagagtccgtcagatatctttgccagagaaaccagtcgatcct
aaatttcctatggatgaaatttaa
DBGET
integrated database retrieval system
