Brassica rapa (field mustard): 103829989
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Entry
103829989 CDS
T03449
Name
(RefSeq) probable arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00541
Biosynthesis of various nucleotide sugars
brp01100
Metabolic pathways
brp01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
103829989
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
brp01005
]
103829989
Enzymes [BR:
brp01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
103829989
Lipopolysaccharide biosynthesis proteins [BR:
brp01005
]
Lipid A
103829989
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
GAF_2
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103829989
NCBI-ProteinID:
XP_009103929
UniProt:
M4CG59
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All DBs
Position
A07:17718169..17720026
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AA seq
347 aa
AA seq
DB search
MGSLPPPHLDFSSANHGNEHHHHQEISKDNLLALFKSQQDLLNYFFKHLDLSQTLDFSRI
LLSTSGTVFFTGVGKSAFVANKISQTLISLSFRSSFLSPLDALHGDIGALSSRDVLVLFS
KSGSTEELLRLVPCAKARGAFLVSLTSVPANPLAGVCDMNVHLPLQRELCPFNLAPVTST
AIQMVFGDTIAVALMAARNLTKEEYGANHPAGRIGKSLIFKVKDVMKKKEELPVCKEGDL
IMDQLVELTSKGCGCLLVVDEHHRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRT
IGPETMAVEAMKKMESPPSPVQFLPVVNEDDTLIGIVTLHGLVSAGL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgggatctctaccaccgccacatctcgacttctcctccgccaatcacggcaacgaacat
caccaccaccaagaaatctccaaagacaacctcctcgccctcttcaaatcccagcaagat
ctcctcaactacttcttcaaacacctcgacctctcccaaaccctcgacttctcccgcatc
ctcctctccacctccggcaccgtcttcttcaccggcgtcggcaaatccgccttcgtcgcc
aacaaaatctcccagaccctgatctccctcagcttccgctcctccttcctctcccctctc
gacgcgcttcacggcgacatcggcgctctctcctcccgcgacgttctcgtcctcttcagc
aagtccggctccaccgaggagctgctccgtctcgtcccctgcgctaaggctaggggagcc
ttcttggtgtctctcacctccgtccctgcgaatccgctcgctggagtttgcgatatgaat
gtgcatttgccgttacagagggagttgtgtccgtttaatctcgctccggtgacgtctacg
gcgatccagatggtgtttggggataccattgcggttgcgctcatggcggctaggaatcta
acgaaggaggagtatggcgctaatcatcccgccggtaggatcggcaagagcttgattttc
aaggtaaaggatgttatgaagaagaaagaagagcttccggtttgtaaagaaggagacttg
ataatggatcagttagttgagctaaccagcaaaggatgtgggtgtttgcttgtggttgac
gaacatcatcgcttgatcggtacattcacagatggagatcttcgcaggactcttaaagca
agtggagaagcaatcttcaaactcagcgttggagaaatgtgcaacaggaagccgaggacg
attggaccggaaacaatggctgttgaagcgatgaaaaagatggagtcaccgccatcgccc
gtacagtttctaccggtggttaatgaagacgacaccttgattggaattgtaacattgcat
ggtttggtttcagctggtctctga
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