Brassica rapa (field mustard): 103830015
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Entry
103830015 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG10 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103830015
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103830015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103830015
NCBI-ProteinID:
XP_009103958
UniProt:
M4CG80
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Position
A7
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AA seq
710 aa
AA seq
DB search
MASGRDSSSSDEQETSLYTSDGDKRIYHRHSNHQIQKLEAYFKECPHPDDLQQLKLGEEL
KLKQKQIKFWFQNKRTQAKVQNEKADNASLRTENMKIRRENEAMQEALNTVTCPPCGGPH
PEQVDRKLYFQNLSANNAYLREERDKLSILVYKTEGHPKPIVNALAYLHGPSLHASTSNN
PHVTYGTSSNHLVEPPSLLRELYLREHISFAQPPQPRQLQCSPPLSNMEKVMMTEAMVAA
VTEVITLIQTEEPMWIKSSIDSRLVIDQENYEKKFTKNSYFKTRIESSKEIAVIPLDAKN
LVNMLLDTEKWASLFSTIVSKAKTIHVLESSKLMYEQLHILSPLLPPREFMILRCCQQLE
EGLWVIADVSYHQVAFEFEFGTPACYKRPSGFLIQAMPNGHSKVTWMEHVEVNDKVRAHR
IYRDLLCGGFGYGARRWTATLERMCERLSLYSVSDFPTTDDPGVVKTINGRRRLMDLGER
MLKNFAWILNMPEKSDFSQQSATNSSGVNISVRVNKEAGQPVGLIVCACSSLCLPLAPLQ
VYNFLKNLEVRHQWDVLCHASPVTEVARFVTGANNKNCVNILQPSSAAEGGDLMIIQDSF
IDALGGMVVYAPVDLSTAHAAVSGNVNPSDIPILPSGFVISRDGRPSATAELDGGCDNCK
TLLTVAFQILVTGPTIYEELQMDKWTTSVDTLISSTITKVKAMLNCHDGQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggtcgtgatagcagctcaagtgatgaacaagaaacttctctgtacaccagt
gatggggataaaaggatttaccatcgccactctaatcatcaaattcaaaagcttgaagcg
tatttcaaggagtgtcctcatccagacgatttgcagcaacttaaattgggcgaagaactg
aaacttaaacaaaaacaaatcaaattttggtttcaaaacaaaagaacccaagccaaagtt
caaaatgaaaaagcagacaatgcatcacttagaacagagaatatgaaaatacgacgtgag
aacgaagcaatgcaagaggcattgaacactgtgacttgccctccatgtggtggccctcat
cctgagcaagtagatcgcaagctctatttccaaaacctcagtgcaaataacgcatatctc
agagaagagcgtgacaaactctcaattttggtatacaagaccgaaggccatccaaaacct
attgtcaatgctttagcctatctccatggtccatcattgcacgcatcgacttccaacaac
ccacatgtcacatatggaacctcttccaaccatctcgtggagccgccaagcttgttaaga
gaactataccttcgtgaacacatcagcttcgcccaaccgcctcagccgcgacaactgcaa
tgttccccgccactatctaatatggagaaagtgatgatgactgaagcgatggtagctgct
gtgacggaggttataactctgattcaaactgaagaaccaatgtggattaagtcgtcaatc
gatagtaggctcgtaattgatcaagagaactatgagaaaaagtttactaaaaatagctat
tttaagactcgtattgagtcttccaaggaaatcgcggtgattccattggatgccaaaaac
ttggtgaacatgctcttagatacggagaaatgggcgagtcttttctcaacaattgtgagc
aaagctaaaacaattcacgtgctggaatcctcgaaattgatgtatgagcaactgcacata
ctgtcgccattgctgccaccaagagagtttatgattctaagatgttgccaacaactggag
gaaggtctctgggtgattgctgacgtttcttaccatcaagtagcctttgagtttgagttt
gggactccggcttgctacaaacgtccttccggttttctcatccaagccatgcccaatggt
cactctaaggtgacgtggatggagcacgtggaagtaaatgataaagtgcgggcacatcgg
atttacagagacctcttatgcggcggctttggctacggagctcgccgttggaccgctact
cttgagagaatgtgtgagaggctatctctctactctgtctctgacttcccgacgactgac
gaccccggagttgtgaaaaccataaatggaagaaggagactcatggatttaggagaaaga
atgttgaagaattttgcatggatactaaatatgcctgaaaaatctgatttttcgcaacag
tctgcaaccaacagcagcggagttaatatttcggtgcgtgtaaacaaagaagccggccaa
ccggtcggtctcattgtctgcgcttgttcatctttatgtctccctcttgctcctctccaa
gtctacaacttccttaaaaatctcgaggttcgccaccagtgggacgttctctgccatgcg
agtccggttactgaggtcgctcgctttgtcactggagcaaacaataagaactgtgtgaat
attctccagccttcaagtgcagcggagggtggtgacttgatgataatacaagacagcttc
atagatgcattaggaggtatggtggtctacgctccagtggacctaagcactgcacacgct
gccgtttcaggtaatgtcaatccttctgacattccaatcctcccatccggtttcgtcatc
tcccgtgacggccgtccctccgcaaccgctgagctagacggtggctgtgacaattgtaag
acgctcctgacggtggctttccagatccttgtcactggtccgactatctatgaagaactc
caaatggataaatggaccacctcagtcgataccttgattagctccactattacaaaggtt
aaagccatgcttaactgccatgatggacagtga
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