Brassica rapa (field mustard): 103830105
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Entry
103830105 CDS
T03449
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103830105
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103830105
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
103830105
NCBI-ProteinID:
XP_009104062
UniProt:
M4CGF3
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All DBs
Position
A07:complement(18344740..18347853)
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AA seq
433 aa
AA seq
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MARCHGSLAIFLCVLLMLACCQALSSNVDDGYGHEDGSFETDSLIKLNNDDDVLTLKSSD
RPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKSIRFR
GPCKSLRSFQILGTLSASTKRSDYSNDKNHWLILEDVNNLSIDGGSAGIVDGNGKIWWQN
SCKIDKSKPCTKAPTALTLYNLNNLNVKNLRVRNAQQIQISIEKCNSVDVKNVKITAPGD
SPNTDGIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDN
SKAYVSGINVDGATLSETDNGVRIKTYQGGSGTAKNIKFQNIRMDNVKNPIIIDQNYCDK
DKCEQQESAVQVNNVVYRNIQGTSATDVAIMFNCSVKYPCQGIVLENVNIKGGKASCKNV
NVKDKGTVSPKCP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttgtcatggaagtcttgctattttcttatgcgttcttttgatgctcgcttgc
tgccaagctttgagtagcaacgtagatgatggatatggtcatgaagatggaagcttcgaa
accgatagtttaatcaagctcaacaacgacgacgacgttcttaccttgaaaagctccgat
agacccactaccgaatcatcaactgttagtgtttcgaacttcggagcaaaaggtgatgga
aaaaccgatgatactcaggctttcaagaaagcatggaagaaggcatgttcaacaaatgga
gtgactactttcttgattcctaaagggaagacttatctccttaagtctattagattcaga
ggcccatgcaaatcattacgtagcttccagatcctaggcactttatcagcttctacaaaa
cgatcggattacagtaatgacaagaaccactggcttattttggaggacgttaataatcta
tcaatcgatggcggctcggcggggattgttgatggcaacggaaaaatctggtggcaaaac
tcatgcaaaatcgacaaatctaagccatgcacaaaagcgccaacggctcttactctctac
aacctaaacaatttgaatgtgaagaatctgagagtgagaaatgcacagcagattcagatt
tcgattgagaaatgcaacagtgttgatgttaagaatgttaagatcactgctcctggcgat
agtcccaacacggatggtattcatatcgttgctactaaaaacattcgaatctccaattca
gacattgggacaggtgatgattgcatatccattgaggatggatcgcaaaatgttcaaatc
aatgatttaacttgcggccccggtcatggcatcagcattggaagcttgggggatgacaat
tccaaagcttatgtatcgggaattaatgtggatggtgctacgctctctgagactgacaat
ggagtaagaatcaagacttaccagggagggtcaggaactgctaagaacattaaattccaa
aacattcgtatggataatgtcaagaatccgatcataatcgaccagaactactgcgacaag
gacaaatgcgaacaacaagaatctgcggttcaagtgaacaatgtcgtgtatcggaacata
caaggtacgagcgcaacggatgtggcgataatgtttaattgcagtgtgaaatatccatgc
caaggtattgtgcttgagaatgtgaacatcaaaggaggaaaagcttcttgcaaaaatgtc
aatgttaaggataaaggcaccgtttctcctaaatgcccttaa
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