Brassica rapa (field mustard): 103830285
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Entry
103830285 CDS
T03449
Name
(RefSeq) homeobox-leucine zipper protein HDG1
KO
K09338
homeobox-leucine zipper protein
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103830285
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103830285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103830285
NCBI-ProteinID:
XP_009104292
UniProt:
M4CGV6
LinkDB
All DBs
Position
A7
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AA seq
785 aa
AA seq
DB search
MNFNGYLGDGSSRDRISDVPYSDNFSFSAAATMPHSRPFSSNGLSLGLQTNGVNGEAFET
NVTRNKSRGGEDVESRSESDNAEAVSGDDLETGDKPPRKKKKRYHRHTAKQIQDLESVFK
ECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENMS
VREAMRNPMCSNCGGPAVLGEVSMEEQHLRIENSRLKDELDRVCALTGKFLGRSPSGSHH
VPDSSLVLGVGVGSGGGFTLSSPSLPQASPRFEISNGTGLATVNIQAPVSDFDQRSRYLD
LALAAMEELVKMAQRHEPLWVRSSDTGFVMLNKEEYDTSFSRVVGLKQDGFVSEASKETG
NVIINSLALVETLMDSERWAEMFPSMISRTSTTEIISSGMGGTRNGALHLMHAELQLLSP
LVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSSCRRLPSGCLVQDMANGYSKVTW
IEHTEYDENRIHRLYRPLLSCGLAFGAQRWMAALQRQCECLTILMSSTVSPSRSPTPISC
NGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVDDPGEPPGIVL
NAATSVWMPVSPKRLFDFLGNERLRSEWDILSNGGPMQEMAHIAKGHDHSNSVSLLRATA
INANQSSMLILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPSAPQ
LSEERNGNGSGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL
HCDSN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatggttatctcggcgacggttcttccagagatagaatctccgatgttccg
tacagtgacaatttctctttctccgccgcagccaccatgcctcactctcgtccattctcc
tctaacggcctctctcttggactccaaacgaatggagtaaacggagaggctttcgagacg
aatgtaactcgtaataagagtagaggaggagaagatgtagaaagcagatctgagagtgat
aacgctgaagctgtctccggcgacgatctcgaaaccggagataaacctccgaggaagaag
aagaaacgttaccatcgtcacacagctaaacaaatacaagacctcgaatcggtgttcaag
gagtgtgcacatcccgacgagaaacagcgtcttgatctcagccgtagacttaacttagat
ccacgacaggtcaagttctggttccagaaccgccgtactcagatgaagactcaaatcgag
cgtcatgagaatgctttgttaagacaagagaacgataagcttcgagctgagaacatgtcc
gtacgcgaagctatgaggaaccctatgtgcagtaactgcggcggaccagctgttctcggc
gaggtctccatggaggagcaacacctacgcatcgaaaactcgcgtctcaaagacgagtta
gaccgggtctgcgccttaaccggtaaattccttggccggtctccctccggttcacatcat
gtaccggactcatcactcgtcctcggtgttggagttggatccggtggtggtttcactctc
tcatctccctcgttgcctcaagcttctccgagatttgagatttccaatggtaccggttta
gctacggttaacattcaagcaccggttagtgattttgatcagaggtcgaggtatctggac
ttggctcttgcggctatggaggagcttgtgaagatggctcagagacacgagccgctttgg
gttcggagctcggatactgggtttgtaatgctgaacaaggaagagtacgacacaagtttc
agtcgtgttgttggactgaagcaagatgggtttgtgtcggaagcttctaaagaaactgga
aacgttatcatcaatagcttagcactcgttgaaaccttaatggactcggaacgatgggcg
gagatgtttccatctatgatctcaagaacttcgaccacagagattatctctagtggcatg
ggagggacacgaaacggtgcacttcatctgatgcacgcagagcttcaactattgtctcca
ctcgtgcctgtacgacaagtctcgttcttgcggttctgtaagcagcacgcggaaggtgtt
tgggcagtggtagatgtctcaattgattccataagagaaggttcttcttcaagctgtaga
aggttaccgtctggttgcctcgtacaagacatggccaatggctactccaaggtaacgtgg
atcgagcacacagagtacgacgagaatcgcatccaccgcttataccgcccgttactcagc
tgcggtctagcgtttggtgcacagcgttggatggctgcgttacaacgtcaatgtgaatgc
ctcactattctcatgtcctccactgtttcaccttcacgtagcccaacacccattagctgt
aatgggaggaagagcatgttgaagctagcaaagaggatgacagataatttctgcgggggc
gtttgtgcatcgtcgttgcagaaatggagcaaacttaacgtcggaaacgtcgacgaagac
gttaggattatgactaggaaaagtgtggacgatcctggtgaaccgcctggaatcgtttta
aacgctgcgacttccgtttggatgcccgtttctccgaagcggttgtttgatttcttaggg
aatgaacggttgagatctgaatgggatatcttatccaacggtgggcccatgcaagagatg
gcccatatcgctaaaggccatgaccattcaaactctgtctccttactccgcgccacggcc
attaatgcgaatcagagtagtatgctgatactacaggagacaagcatagacgctgcagga
gccgttgtggtgtacgcgcctgttgatataccagcgatgcaagctgtgatgaacggtgga
gattctgcttacgtggcactacttccctcaggattcgccattctccctagcgctccgcaa
ctgtcagaggaacgtaacggtaacggtagcggtgggtgcatggaggaaggagggtcgttg
ctgacggtggcgtttcagatactggtgaatagtttgcctacggctaagctgacggtggaa
tcagtagagactgttaataatctgatatcgtgtaccgttcagaagattaaagctgctctt
cattgtgatagcaactga
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