Brassica rapa (field mustard): 103830342
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Entry
103830342 CDS
T03449
Name
(RefSeq) proline--tRNA ligase, cytoplasmic isoform X2
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103830342
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103830342
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103830342
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
103830342
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103830342
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103830342
Prokaryotic type
103830342
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
Retrotrans_gag
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
103830342
NCBI-ProteinID:
XP_009104369
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All DBs
Position
A07:complement(19432403..19435683)
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AA seq
625 aa
AA seq
DB search
MKKNSARVYELKEELRACRQRKGMTVDDYYNKLKTIWEDLATYQHKPNSCLCGGSNCEDV
NTSRDEERLHQFLLGLDASIYTNVKNEILDMDPLPSLEQAYSMVAQEEENRVSSNQELSG
ELAVYAISSVEEESVETADTNLGVTVKKDEDFGQWYSQVCRCGEMMAYYDISGCYILRPN
AMKIWNIMRTYFDAVLEKAEVDENYFPLFVSASVLEKEKDHVQGFAPEVAWVTKAGKSDL
NVPIAIRPTSETVIYPYFSKWIKSHRDLPLKLNQWNNVVRWEFSKPTPFIRSREFLWQEG
HTAHATEEDADNEVLEVLDHYRHLYEEYLAVPVVKGMKSENEKFAGARYTTSVEAFIPET
GRGIQGATSHCLGTKFAKMFDIKFTNKEGKNELVWQNSWAYSTRTIGVMIMTHGDDKGLV
NPPKVAPIQVIVIPVPFKDADTKEISKACCAVKDALREAGIRAKEDLSDNYSPKWKYSHW
EMKGVPLRIEIGPRDLAKNQVRTVRRDNGVKADVPRVGLVEHVKELLGKIQQNMFDVAKQ
KRDDACVVVKTWDEFVEALGQKKLILAPWCDEAEVEMDVKRRTKDEVGAAKTLCSPFDQP
EIPEGTLCFASGKLAKKWTYWGKSY
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacagtgctcgagtttatgaactcaaggaagaattaagagcatgcaggcag
aggaaaggcatgactgttgacgattattacaacaaactcaaaactatttgggaagatctc
gcgacttaccaacacaaacctaattcgtgtctttgcggtggaagcaactgcgaagatgtg
aatacatctagggacgaagagagattacatcagttcctcttgggattagatgcttcaatc
tataccaatgttaagaacgagatccttgacatggacccattaccaagcttggaacaagct
tattcgatggttgctcaagaagaagagaatagggtttcgagtaatcaagaattaagcgga
gaacttgccgtttatgcaataagtagcgtagaggaagaatctgtggagacggctgacacc
aatcttggcgtaacggtcaagaaagatgaagatttcggacaatggtattctcaggtttgt
aggtgtggtgagatgatggcatactatgacataagtggatgttacattctaaggccaaat
gctatgaagatttggaatattatgcgaacttactttgatgctgtattggagaaagcagaa
gtggatgagaattatttccctctgtttgtatcagctagtgttcttgagaaggagaaggat
cacgtacaaggttttgctccagaggttgcatgggttacaaaagctggtaaatctgatttg
aacgttccaattgcaattcgtccaacgagtgagactgtgatatatccttacttcagcaag
tggataaagagccaccgtgacttgcctttgaagcttaatcaatggaacaatgttgttaga
tgggagtttagcaaacctactccgttcatcaggagccgagagttcttgtggcaagaagga
cacactgctcacgctacagaagaagacgcagataatgaggttcttgaggttttggaccat
taccgtcacctttatgaagaatatctcgcagtcccagttgtaaaaggtatgaagagtgag
aatgagaagtttgcaggtgcacgttacaccacaagtgttgaggctttcataccagaaact
ggtcgtggtatacaaggtgcaacctcgcattgcttaggaacaaagtttgcaaagatgttt
gacatcaaatttacaaataaagaaggaaaaaacgaactggtgtggcagaattcttgggct
tatagtaccagaacgattggagtgatgataatgactcatggagatgacaaaggattggtg
aatcctcctaaagtagcaccaatccaagtcattgtgatcccagtgccattcaaagatgcg
gataccaaggagatatctaaagcttgctgtgccgtgaaagatgccttgcgggaagctggt
atacgtgctaaagaagatttgtctgataactattctcctaaatggaagtattcacactgg
gagatgaaaggtgttccacttagaattgagatcggacctagagatttagccaaaaaccag
gtcagaactgtgagaagagataatggagttaaggctgatgttccaagagtaggtttggtt
gaacacgttaaggagttgcttggaaagattcagcaaaacatgtttgatgtagctaagcag
aagcgagatgatgcttgtgtggttgtaaagacttgggatgagtttgttgaagcacttggt
caaaagaaactcattttagctccatggtgcgatgaagcggaggttgaaatggacgttaag
agaaggaccaaagatgaagttggagcagctaagactctttgttctccatttgaccagcct
gaaattccagaagggactctatgttttgcttcaggaaagcttgctaagaagtggacttat
tggggcaagagttattag
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