Brassica rapa (field mustard): 103830401
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Entry
103830401 CDS
T03449
Name
(RefSeq) golgin candidate 5
KO
K20286
TATA element modulatory factor
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103830401
Membrane trafficking [BR:
brp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103830401
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GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
ATG16
Motif
Other DBs
NCBI-GeneID:
103830401
NCBI-ProteinID:
XP_009104427
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All DBs
Position
A07:complement(19648371..19653723)
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AA seq
938 aa
AA seq
DB search
MAWFSDKISLGGFPDLTGAVNKFQESVKNIEKNFDNALGFDDKSESAGEASSMWPPVMSF
MGNTSDEKLDSLEDSASSENPPQSEEEEKEEGSGKVATEQAVSVEANKETNVSTEADQAE
VPEVTETVALDPKDGEPESQMALEDSSGHSVQRPGDTSSLEPDEKQELAAASTESPKSED
AGSEAEEAMPEEDAGTNEVSLGNNEAVSSPVIADTDETNNDQESQSENLEKRTSSVNVEV
SPDTDNINRVEPSDAQLSLITESAGSANESSVLKRSPSDEISERVVDFVSRELDSRLDGS
ELIDSQRSSSATNASDSADVIMELEKTKKEMKMLENALQGAARQAQAKADEIAKLMHENE
QLKSATEDLKRKSNEAEVESLREEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALL
KEKDEIINQVMAEGEELSKKQAAQEGQIRKLRAQIREVEEEKKGLITKLQSEENKVESIK
RDKTATEKLLQETIEKHQAELASQKEYYSNALAAAKEAQALAEERTNNEARIELENRLKE
AGERESMLVQALEELRQTLSKKEQQVVFREDMFRRELEDLQRRYQASERRCEELITQVPE
STRPLLRQIEAMQETTARRAEAWGAVERTLNARLQEAETKAATAEERERSVNERLSQTLS
RINVLEAQLSCLRAEQGQLSKSLEKERQRAAENRQEYLAAKEEADTLGGRANQLEVEIME
LRRKHKQELQEVLLHNELIQKDLEREKATRLDLERTARINSSTASEQLPISRQNSTYENG
GLQRKLSSASSLGSMEESYFLQASLDSSDKSSEKRSMPEATMSPYYMKSITPSAYEATLR
QKEGELASYMSRLASMESIRDSLAEELVKMTAECEKLRGEADRVPGIKAELEALRQRHAA
ALELMGERDEELEELRADIVDLKEMYKEQVNMLVNKIQ
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggcttggttcagtgacaagatttctctgggaggattcccggatctcacaggggcagtt
aataaattccaggagagcgttaagaacatcgagaagaatttcgataacgcccttggcttt
gatgacaagtccgaatctgccggtgaagcttcaagtatgtggccacctgtaatgtccttc
atgggtaacacctctgatgagaaacttgattcattggaagactctgccagctcagaaaat
ccacctcaatccgaagaagaagaaaaagaagaaggatctggtaaggtagctactgaacaa
gcagtatcagttgaagcaaataaagaaacaaatgtgtcaacagaagctgaccaagcagag
gttcctgaggtaacagagactgttgctttagatcccaaagatggtgaacctgaatctcag
atggctctagaagattcttcaggacattcggttcaacgtcctggtgacacgagtagttta
gaacctgatgagaagcaggaattggcagctgcttcaacagagtcacccaagtccgaagat
gctggatcagaggcagaggaggctatgcctgaggaggatgctggaacaaatgaagtttct
ctaggaaataacgaagctgtttcctctcctgtgattgctgatacggatgagacaaacaat
gatcaggaaagccagagtgaaaatctggagaagagaacatcgtctgtaaatgttgaagtt
tcacctgatacagataatattaacagggtagagccctctgatgctcaactgtctttaatt
actgagtcggctggttctgctaatgagtcttctgtgctgaagagatctccttcagatgaa
atttcagagagagttgtagattttgtttctcgtgaactggattcaagacttgatggtagt
gaattaattgacagccagcgttcgagctctgcaacaaatgcttctgactctgctgatgtt
attatggaattagagaagacaaaaaaggaaatgaaaatgttggaaaatgcactgcaaggt
gctgcaaggcaagctcaggcaaaggctgatgagattgcaaagttaatgcatgaaaatgag
cagctaaaatctgccactgaggatttgaagaggaaatccaatgaagctgaagttgagtct
ttgcgagaagaataccatcagagagttgctactcttgagaggaaggtttacgcactcacc
aaagaaagggatacacttagaagagaacagaacaagaaaagtgatgctgcggcccttctg
aaggagaaagatgaaataataaatcaagttatggctgaaggcgaagagctttcgaagaaa
caagctgctcaagagggtcagatcaggaagctgagagctcagattagagaggtggaagaa
gagaagaaaggactgatcacaaagcttcagtctgaagaaaataaggtagagagtattaaa
agggacaagacagctacagagaagctgctgcaagagaccatagaaaaacatcaagccgaa
cttgcttctcagaaagagtattactcgaatgcattagctgcagcaaaggaagctcaagca
ttagcggaggagcgtaccaacaatgaggcgagaatagagttagagaatcgtctaaaggag
gccggagagcgggaatctatgctagtacaggcgctggaagaattgaggcaaaccttaagc
aaaaaggagcaacaggtagtgtttagggaagacatgttccgcagagaacttgaagacctt
caaagacgttatcaggctagtgaacgaaggtgtgaggaattaatcacccaagttcctgag
tctacaaggcctctcctaagacagattgaggcaatgcaggaaactactgccagaagagca
gaagcttggggtgctgtagagagaactttgaatgcccgactgcaggaagcagaaactaaa
gctgccacagctgaagagcgagagcgctctgtgaatgaacgcctctctcaaaccttatca
aggattaatgttctagaggcccagctttcatgtcttagagcagaacaaggccagttaagt
aagtcgctcgagaaggagaggcaaagagcggcagagaatagacaggagtatctggcagct
aaggaagaagcagataccttaggcggtcgagcaaaccaacttgaagtggaaatcatggaa
ctgcggagaaaacataagcaagagttgcaagaagtgctgctccacaacgagcttattcaa
aaggacctagaaagggagaaggctacccgtttggatcttgaaagaactgcccgtatcaat
tcctcgacagcctctgaacagcttcccatatcaaggcaaaattctacctatgagaatgga
ggcttgcaaagaaagctctcaagcgcaagcagccttggcagcatggaggagagctatttt
ctgcaagcttcgcttgattcgtcagataaatcttctgagaagagaagcatgcctgaagca
actatgagtccatactacatgaagagcatcacaccgagtgcttatgaagccacacttcga
cagaaagagggtgaacttgcttcttacatgtcccgcttggcgtcaatggagtctatccga
gattccctagctgaagaactagtcaaaatgaccgcagagtgtgagaaattaagaggggag
gcggatagggtgccgggcataaaagcagagctggaagcactaagacaaaggcatgcggct
gctctggaattgatgggtgaacgagatgaggagttggaggaacttcgagcggatatagtg
gacttgaaggaaatgtacaaggagcaagtgaacatgctggtgaacaagatccaatga
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