KEGG   Brassica rapa (field mustard): 103830476
Entry
103830476         CDS       T03449                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:brp01002]
    103830476
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:brp03110]
    103830476
Peptidases and inhibitors [BR:brp01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   103830476
Chaperones and folding catalysts [BR:brp03110]
 Other chaperones and cochaperones
  AAA proteases
   103830476
SSDB
Motif
Pfam: AAA Peptidase_M41 AAA_lid_3 DUF5906 TIP49 AAA_16 RuvB_N ATPase AAA_5 AAA_22 AAA_28 nSTAND3 AAA_17 AAA_18 AAA_33 AAA_14 RNA_helicase TsaE Sigma54_activ_2 Mg_chelatase
Other DBs
NCBI-GeneID: 103830476
NCBI-ProteinID: XP_009104519
LinkDB
Position
A07:complement(20017286..20022468)
AA seq 1008 aa
MDIAIPYKPNPLISSPTNLLKRPKSSGLVRFPAKYGHRVTRKNPIFRVYASESSNGSSSN
NGGGFSWLRLTLSLRLGVERIGEKIGESVKKETGFDPEEAGARVDEYVGRVKASVKKGQG
ELTRFRTEIVPSFIDWNKWEHWKDIKNWDGRRVAALMIYAFAVLFSCQRVYVAVQAPRIE
RERRELTESFMEALIPEPSPDNIDKFKRNMWRKTTPKGLKLKRFIEAPDGTLVHDTSYVG
ENAWDDDLESTEGSLKKIIDRNARIQTEAKKKLSRDLGVSGEVGGSVGTWQERLATWKEM
LEREKLSEQLNSSRAKYVVEFDMKEVEKSLRKDVVEKTSETEGTRALWISKRWWRYRPKL
PYTYFLQKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYIVDIPLDPYLFETISNSGVEVD
LLQKRQIHYFMKVFIALLPGILILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFIL
PVGDVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVPFVRGVLLSGPPGTGKT
LFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRH
ARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDR
RLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRK
GRSSIYQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLF
PRFDWHAFSQLLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD
DVSDGGKDDLEKITKIAREMVISPQNTKLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPH
VMPADMSIEVSELFTRELTRYIEETEELAMNALRANRHILDLITGELLERSRITGLEVEE
IMKSLSPLMFEDFVKPFQINADEEEPLPHKDRVSYQPIDLRPAPLHRC
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggatattgcgattccgtataaaccgaaccctcttatctcttcgccgacgaacttgctc
aaaagacctaaaagttccggtcttgttcggtttcccgcaaagtatggacaccgagttaca
aggaaaaatccgatctttcgtgtatacgcgtctgaaagtagtaatgggtcttcgtctaat
aacggtggagggttctcatggttgaggttgacgctgtctcttcgtcttggcgtggagcgg
attggggagaagattggagagtctgtgaagaaggaaactgggtttgacccggaagaagca
ggtgcgagagtggatgagtatgtgggtcgtgttaaggctagcgtgaagaagggccagggc
gagttgactcgctttaggactgagatagtgccatcttttattgattggaacaagtgggaa
cactggaaggacatcaagaattgggacggtagacgagttgctgcattgatgatatatgct
tttgcggtgttgttttcttgtcaaagagtttatgttgccgtccaagctccccgtatagaa
cgagaaagaagagagttaactgagtcttttatggaggctttgatccctgagccatctcct
gacaatatagataagtttaagagaaatatgtggaggaagacaacacctaaaggcttgaaa
ctaaaaaggttcattgaagcgcctgatggaacacttgtccacgatacttcctatgttgga
gaaaatgcatgggatgatgatctggagtcaacagagggatctctcaaaaaaatcattgac
agaaatgcgaggattcagacagaggcaaagaagaaactaagccgtgatttgggtgtctct
ggtgaagttggaggcagtgtaggtacatggcaggaaaggcttgcaacctggaaggaaatg
ttggaaagagaaaaattatcagagcagttaaactcgtcaagggccaagtatgttgttgaa
tttgatatgaaagaggtggagaaaagtcttcgcaaagatgttgttgaaaagacctctgaa
actgagggaacaagagctctctggatatcaaagagatggtggcgttatcgccctaagctt
ccttatacctattttcttcagaagcttgattcttcggaggttgcagctgttgtcttcacg
gaagatctaaagagactgtatgtgacaatgaaagaaggtttccctctagaatatattgtt
gacattccattagatccatacttgtttgagactatttctaactccggagttgaggtggat
ctccttcagaaaaggcagatccactacttcatgaaagtgttcattgcacttctgcctggg
atactaattctatggtttataagagaatccgccatgcttctcctcatcacatcaaagcgg
tttctatacaagaagtataatcagctgtttgatatggcttatgcggaaaattttatactg
ccggttggagatgtcagtgagacaaaatcaatgtacaaggaagtggtactaggcggtgat
gtttgggatcttcttgatgagctaatgatctacatgggaaacccaatgcaatactatgaa
aaagatgttccctttgtcaggggtgtgcttctttctggacctcctgggacagggaaaaca
ctttttgcgcgaacactggcaaaggaaagtggactaccatttgtgtttgcgtctggtgcg
gagttcacagacagtgaaaaaagtggtgccgcaaagatcaatgagatgttttcagtggcg
agacgaaatgcacctgcatttgtgtttgtggatgaaattgatgctattgctggtagacat
gctaggaaagatccaaggagacgagcaacgtttgaagctttaattgcacagctcgatgga
gagaaggaaaagacaggtattgataggttttcattgagacaagctgtgatatttatctgc
gctaccaatagacctgatgaactcgaccttgagtttgtccgctctggacgtattgaccgt
cggctgtatattggtttgcctgatgcaaagcaaagggtgcaaatatttggagttcacagc
gccgggaagaaccttgctgaagatatagactttgggaagcttgttttccggacagttggg
ttctctggggcagatatccggaaccttgttaatgaagcagctataatgtcggtgaggaag
ggacgttcgtctatatatcagcaagacattgttgatgtgttagataaacaattgctcgag
ggtatgggtgtacttcttacagaggaagagcaacagaaatgtgaacaaagtgtatcttat
gagaagaagagacttctggctgttcatgaggctggtcatatagtgttggctcatttgttt
cctcggtttgactggcatgcattttctcagctccttcctggtggcaaggaaactgctgtt
tcagtgttctatccacgcgaagacatggtggaccaaggttatacaacatttggttatatg
aagatgcaaatggtggtagctcatggtggacgctgtgctgaacgtgtggtttttggtgat
gatgtcagtgatggaggaaaagatgacttggagaagataacaaaaattgccagggaaatg
gtgattagcccccaaaatacaaaattgggtctcactcaactggtaaaaaagattggaatg
gtggatttaccagataatccagacggcgagctgattaaatacagatgggaccatcctcat
gtaatgccggcagatatgtctattgaagtatccgagctattcacccgcgagttgacaagg
tacattgaggaaactgaagaacttgcgatgaatgctctgagagcaaacagacacattctg
gatttgatcacaggagagttgctggaacgatcaaggataactggattggaagttgaagag
ataatgaagagtctttctcctttaatgtttgaggattttgtgaaaccattccagataaac
gcagacgaagaggaacctttgcctcacaaggatcgagtgagctatcagccaattgattta
cgtcctgcaccactccacagatgctag

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