Brassica rapa (field mustard): 103830646
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Entry
103830646 CDS
T03449
Name
(RefSeq) protein SHI RELATED SEQUENCE 5
KO
K27807
short internodes/stylish family transcription factor
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103830646
Transcription factors [BR:
brp03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103830646
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Motif
Pfam:
DUF702
PFO_beta_C
Motif
Other DBs
NCBI-GeneID:
103830646
NCBI-ProteinID:
XP_009104702
UniProt:
A0A397YY32
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Position
A07:20858617..20872567
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AA seq
331 aa
AA seq
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MAGFFYLGGRDNNKQDLHQVDKSSYLYLYKDEIYNTNKGFEIWPPQYFQEQHQQHVTAPA
NFYSFGMVPSGSSSNNNNNNRSRSLHFNVVSDHEPGGFTVTRQGSMNCQDCGNQAKKDCS
HMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHRSAFSRETQKAKRLREANG
GGDNVDKDHSGSAGSAIATRVANANSNSGFEVSQNLPPEVSSPAVFRCVRVNSIEEDEDD
QEYAYQTAVNIGGHIFKGILYDQGPEQDHHHQLNLLAPTATTTNAEETAAKTAVTVAGNN
NTGLILDPSSLYPVQLSSYISGTPFFTPPRS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatttttttatctaggagggagagacaacaacaagcaagatcttcatcaagtg
gacaagagcagttatctttatctctacaaggacgagatttataacaccaacaagggtttc
gagatttggcctcctcaatacttccaagaacaacatcaacaacatgtcacagctcctgca
aacttctactcctttggaatggtcccaagcggaagcagcagcaacaacaacaacaataac
aggagccggagtttacacttcaacgtagtctccgatcatgagccgggaggattcacggta
acaagacaaggaagtatgaattgtcaagattgtgggaatcaagctaagaaagattgttct
catatgagatgtagaacatgttgtaaaagccgaggctttcactgtcagactcacgttaag
agcacttgggttcctgctgctaaacgccgtgagcgtttagctcaactcgcctccttgcag
caccgttcagccttcagccgtgaaacgcaaaaggcaaaacgcctacgagaagcaaatggt
ggtggtgataatgttgataaagaccatagtggtagtgctggatcggctattgctacccgt
gtggcgaatgctaattctaattcagggtttgaggtgagtcaaaacttaccaccggaagtt
agctcaccggcggtttttcgatgcgttcgagtgaattcgatagaagaggatgaagatgat
caagaatatgcttatcaaacggctgtgaacattggaggacatatcttcaaaggcattctt
tatgaccaaggaccagaacaagatcaccatcaccaacttaacctccttgctcccacagct
acaaccaccaatgctgaagagactgctgctaaaacggcggttactgttgccggaaacaat
aatactggattaatactcgatccttcgtcgctttatccggttcagcttagctcctacatc
tccggtacgccattcttcacacctccgaggtcttga
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