Brassica rapa (field mustard): 103830647
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Entry
103830647 CDS
T03449
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103830647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103830647
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
103830647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
UBR1-like_wing
Tau95
GT-B_Sucrose_synth
Motif
Other DBs
NCBI-GeneID:
103830647
NCBI-ProteinID:
XP_009104703
UniProt:
M4CHR7
LinkDB
All DBs
Position
A07:20873485..20875380
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AA seq
269 aa
AA seq
DB search
MEDDGRDVHQLDLENADQVLWMMKSPVAVSKTWEKLAPPPSSSSSYSSYPSPGFTSLAKV
VQSVDFPLTEPKFNMEMVGAEYGNMPKSYSLNMFKDFVPMNVLSVVGLEDKPAAEGTVEQ
KFDMKPQGEDIEEYARLCRERTSRAMVKNRQIQVIDNDRGVHMRPMPGMHGFGSSNSKEK
RKALPVKQTDVKRTRRDRGELEGIMFNLFEGQPNWTLKQLVQKTDQPAQFLKEILNELCV
YNKRGSNQGTYELKPEYKKAGEDDTTGGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatggaagagacgttcatcaactcgatttggaaaacgccgatcaagttctt
tggatgatgaagagccctgttgctgtctccaagacgtgggagaagctcgctcctcctcct
tcttcttcttcttcgtactcttcgtatccttcccctggattcactagtttggccaaggtt
gttcagtccgttgattttccactgaccgagcccaagttcaacatggagatggttggtgct
gagtatgggaacatgccaaagagctactctctgaacatgtttaaagactttgttccaatg
aatgtcctttccgttgtcggtctagaagataaaccagctgctgaaggaacggtagaacaa
aagttcgacatgaagccacagggagaagacattgaagagtatgcaaggctttgccgagag
agaacaagcagagccatggttaagaaccgacagatacaggttattgataatgaccgtgga
gtgcatatgaggcccatgcctggaatgcatggttttggttcctccaattcaaaggaaaag
aggaaagctctcccagtgaagcaaacagatgtgaagaggacgaggagagatcgtggtgag
ctggaaggtataatgttcaacctattcgaaggccaaccaaactggaccttgaagcagcta
gtacagaagactgaccaaccagcgcagtttttgaaagagatactaaacgagctttgcgtt
tacaacaagagaggatcgaaccaaggcacatatgagcttaaaccagagtacaagaaagct
ggtgaagatgatacaacaggtggacagtaa
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