Brassica rapa (field mustard): 103830930
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Entry
103830930 CDS
T03449
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103830930
03036 Chromosome and associated proteins [BR:
brp03036
]
103830930
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103830930
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103830930
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103830930
microRNA pathway
RISC loading complex
103830930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
Piwi_N
DUF6079_5th
Motif
Other DBs
NCBI-GeneID:
103830930
NCBI-ProteinID:
XP_009105000
UniProt:
M4CIG5
LinkDB
All DBs
Position
A07:22223853..22227589
Genome browser
AA seq
981 aa
AA seq
DB search
MEEKTKNHHTNKHIRNSKSRTPLLHKPPPPFHHVHTNPLLFPSSSPHQSLNLLSTSIHSS
HYYYYYCFYSQFHNTLPLPLPPLPFHPSPPLLPLPPPDQRFFNSISKPLSLPPVVERKQK
KQVFEHKDNIRNIKVISGSTEAALVVAKRPDSGGQEGSVIYLLANHFLVKFDPSQKIYHY
NVDITPHPSKEIARMIKQKLVETEGKDSFSGSVPAFDGRQNMYSPVEFQEDKLEFFVNLP
IQTCKTLMKCGGDLREKQPQKKVDKLFRVSMRLVSKFDGKKQSESWTPLPQEYIHALDVI
LRENPTEKCTSIGRSFYSSSMGGSKEIGGGSVGLRGFFQSLRQTQQGLALNIDLSIAAFH
ESIGVIAYLQKKLEFLKDLSRNKGRELSLEERREVEKALKNIRVFVCHRETVQRYRVFGL
TEEITESLWFQDRDGKQLRVMSYFKDHYGYEIQFKSLPCLQISRTRPCYLPMELCVICEG
QKFLGKLSDDQTAKIMQMGCQRPNERKDTIDKVMSGPVGPSSGKQTREFNLEVSREMTLL
KGRVLQPPKLKLDRPRSLVVKGTRWALMSIGGSSDQKSTVPKFIHELTQKCEHLGVFLSK
NTTSTTFFEPSHILNNVSLLELKLKEIQRAASSNLQLIICVMERKHKGYGDLKRIAETKI
GVVTQCCLYPNITKLNSQFVSNLALKINAKIGGTMSELYNSIPSHIPRLFRLDEPVIFMG
ADVTHPHPFDDCSPSVAAVVGSINWPEANRYVSRMRSQTHRQEIIQDLDVMVKELLEDFH
KALKKLPNRIIFFRDGVSETQFKKVLQEELQSIKAACSNFDHYNPTITFAVVQKRHHTRL
FRRDPVCHHENIPPGTVVDTVITHPKEFDFYLCSHLGVKGTSRPTHYHILWDENEFTSDE
LQRLVYNLCYTFVRCTKPVSIVPPAYYAHLAAYRGRLYIERSSELTSGGSMNPSCVSRVG
PPKTIPLPKLSDNVKNLMFYC
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaaaccaagaatcatcacactaacaaacacatccgcaactccaaatcaaga
actcctcttctccacaagcctcctcctccttttcaccatgttcacacaaaccctcttctt
tttccttcctcttctccccaccaaagtctcaacctgttatccaccagtatccattctagc
cactactactactactactgcttctactctcagttccacaacactcttcctcttcctctt
cctcctctcccttttcatccttctcctccattacttcctcttcctcctcctgaccaaaga
ttcttcaactcaatctccaaaccgctctctcttcctccagttgtggagagaaagcagaag
aagcaagtttttgaacataaagacaacattagaaacatcaaagtgatcagtgggtcaaca
gaagcagcattagtggttgctaaaagacctgactctggtggtcaagaaggctctgtcatc
taccttctcgccaaccattttcttgtcaagtttgatccttcacagaagatttaccattac
aacgttgacatcactccacatccttcaaaagaaatcgctcggatgatcaaacagaagctc
gtggagacagaagggaaagatagcttctcaggttctgttccagcatttgatggtaggcaa
aacatgtacagccccgtggagtttcaagaagataagctcgagttctttgttaacctccct
atccaaacctgcaagactttgatgaagtgtggtggtgacttgcgtgagaagcaacctcag
aagaaggttgataaactgtttagggttagcatgaggcttgtctccaagtttgatggaaag
aaacagagtgaaagctggactcctctgcctcaagaatacattcatgctcttgatgtgatc
ttgagagagaatccaactgagaaatgtacatccattggaagatctttttactcaagctcc
atgggtgggtccaaggagattggaggaggatccgttggactcagaggctttttccagagc
cttagacagactcagcaaggtttagccctaaacatagacctctcaatagcagcattccat
gaaagcattggggtaatagcttacttgcagaagaagctagagtttctcaaggatctctct
aggaacaaaggcagagagcttagcttggaagagaggagagaagtggagaaagctcttaag
aacataagagtctttgtttgccatagggaaactgttcaaaggtaccgcgttttcggatta
acagaagagatcactgagagcttatggtttcaggatagagatgggaagcagctaagggtt
atgagttacttcaaagatcattatggttatgagattcagttcaagagcttgccgtgtctt
cagattagtaggacaagaccttgttaccttcctatggagctgtgtgtgatatgtgaagga
caaaagtttcttgggaagctttcagatgatcaaactgcaaagattatgcaaatgggttgt
caaagacctaatgaaaggaaagatactattgataaagtcatgtcaggacctgtcggtcca
tcaagtgggaaacaaacgagagagttcaacttggaggtctctagagagatgacattgctg
aaaggaagagtactccaacctccaaagctgaaacttgacaggccaaggagccttgtagtt
aaaggaactcgatgggctttgatgagtattggaggcagctctgatcagaaatctaccgtt
ccaaagttcatacacgagctaactcaaaaatgtgagcatttgggagtcttcctaagcaag
aacacaacgagcacaaccttctttgaaccgtcacacatactcaacaacgtttctcttctc
gagttgaagcttaaggagattcaaagagcagcatcaagcaatctccagctgattatctgt
gtaatggagaggaaacacaaagggtatggagatttaaaaaggatagcagagacaaagatt
ggcgttgtgacgcagtgctgcttataccctaacatcactaagcttaactctcagtttgtt
tcaaacttggctctcaagataaatgccaagatcggtggaaccatgtccgagctctacaac
tcaataccttctcacatccctagattgtttagactcgacgagccggtgatcttcatggga
gctgatgtaacgcatcctcatccgtttgatgattgcagcccttctgttgcggctgtggtc
ggaagcataaactggcctgaagctaaccggtacgtctcgagaatgaggtctcagactcat
aggcaagagatcattcaagatcttgacgtgatggtcaaggaacttcttgaagatttccac
aaagccctaaagaagcttccgaaccggatcatatttttcagagacggtgtgagcgagaca
cagttcaagaaagtcttacaagaagagctacaatccatcaaagccgcttgttctaacttc
gaccattacaacccgaccatcactttcgccgtggtccagaaaagacaccacacgaggctg
tttcggcgcgatcctgtctgccaccacgagaacatacctccaggaacggtggttgatacg
gtgataactcatccgaaagagtttgatttctatctctgtagccacttgggagtgaagggc
acgagcaggccaacgcattaccacatcctttgggacgaaaacgagtttacttcggatgag
ttacagagacttgtgtataacttgtgttacactttcgtgaggtgcacgaaacctgtttct
atcgtgccaccggcttattacgctcacctcgcggcgtacagaggaaggctatacatcgag
agatcatctgaattaactagtggagggtccatgaatccatcttgtgtctctcgagtaggt
cctcctaagacgattccattacctaaactaagtgataatgttaagaatctcatgttttac
tgttga
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