Brassica rapa (field mustard): 103831201
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Entry
103831201 CDS
T03449
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103831201
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103831201
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103831201
NCBI-ProteinID:
XP_009105327
UniProt:
M4CJ70
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Position
A07:23729390..23731948
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AA seq
406 aa
AA seq
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MALLHLSLSLFSCLFLVLAPTYVASSHVSDPELVVQEVNQHINASRRNLGVLSCGTGNPI
DDCWRCDPKWEKNRQRLADCAIGFGKRAIGGRDGKIYVVTDPSDKDAVNPKPGTLRHAVI
QEEPLWIIFARDMVIKLKEELIMNSFKTIDGRGANVHIAGGACITVQYVTNIIIHGVSIH
DCKKRGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLVDVIHGSTAI
TISNNYLTHHDKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWKMYAIGGSAAPTINSQGNRFLAPNDKVFKEVTKYEDAPQSKWKNWNWRSEGDLFLNG
AFFTPSGGRASSKYAKASSLSARPSSLVASVTGNAGALSCKKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcttcacttgtctctctccctcttctcatgtctcttccttgtcctagctccg
acttacgttgcttcctctcatgtctccgaccctgaactcgttgttcaagaagttaaccaa
catataaatgcttctaggaggaatcttggtgtcctctcatgtgggaccggaaatccaata
gacgactgctggagatgcgaccccaagtgggagaaaaaccgacaacgactagctgattgc
gccattgggtttggcaaacgcgcaataggcggccgtgacggcaaaatatacgtggtgacc
gacccgagcgacaaagacgcggttaaccctaaacccggaacgctaagacacgctgtgatc
caggaagaaccgctatggatcatcttcgcacgtgacatggtcataaagctgaaagaagag
ctgatcatgaactccttcaagaccatagatggacgtggagcgaacgtccacatcgctggc
ggcgcgtgcatcactgtccagtacgtgactaacatcatcatccacggcgtaagcatccac
gactgcaagaagagaggcaatgcttacgttagagattctccatcgcattatgggtggagg
actgcgtctgatggtgacgcagtctctatttttggtggatcccacgtgtgggtagaccat
tgctcgttgtcgaactgcgcggacggtctggtcgacgtgatccatgggtcgacggccatt
acgatctctaataactacttgacgcaccacgacaaagtgatgcttttgggacacagtgat
tcgtacacgagagacaagaacatgcaagtcaccattgcttttaatcattttggtgaaggg
cttgttcagagaatgcccagatgtaggcatggatattttcatgtggtaaataacgattat
acgcattggaaaatgtatgcaattggtgggagtgcggctccaacgattaacagtcaaggc
aatagatttcttgctccaaacgataaagtctttaaagaggtgactaaatacgaagatgca
cctcaaagcaaatggaagaattggaactggagatcagaaggtgacttgttcttaaacggt
gcgttcttcacgccctcaggtggaagagcttcttcaaagtatgcaaaagcttctagtctg
tccgctagaccgtcctcgttggtagcttccgtcacgggcaatgctggtgctctctcttgt
aagaaaggatctcgatgttaa
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