Brassica rapa (field mustard): 103831399
Help
Entry
103831399 CDS
T03449
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103831399
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103831399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
103831399
NCBI-ProteinID:
XP_033131908
LinkDB
All DBs
Position
A07:18826092..18831698
Genome browser
AA seq
676 aa
AA seq
DB search
MAKKLIALAFTLIILFAVLTAIIGVHSRTSRNKLGIAKPEQKLASGRLTLKKVGPNQVVV
DNGIIQVTFSSPQGLITGIKYKGFDNVLNNKIKNRGYWDVMWYEPGQEQLIDLLEGVKFN
VINQTSEHVEISFSRAWKISQRGSLVPLNVDKRYIIRRGVSGIYMYAVLEKLKGWPTVDM
DQTRIVFKLNTKFDFMAISDQRQKIMPSEIDRDITNKRANPLAYKEAVRFVNPQNRIFKG
QVDDKYMYSMENKDNKVHGWISSDQRVGFWMITPSDEFRVCGPLKQELTSHVGPTTLSMF
TSLHYAGKDMNTTYTSMEPWKKVYGPVFVYLNSASSTNLLWTDAKRQMVEEVHSWPYDFV
KSVDYPLHQQRGTVKGQFFVMDRYISKSKLFGKFAFVGLAVPGEAGSWQTENKGYQFWTT
ADRMGIFTITNVRPGSYNLYAWVSGHIGDYKYERDITITPGREIDVGAILYEPPRIGATL
WEIGKPDRTAAEFYIPDPDPILSTKLYLNNSYQPQDRFRQYGLWDRYTALYPRNDLVYIV
GVSDYKKDWFYAHVTRNAGNGTYQATTWQIVFSLKAVIKTGNYTFRMALAAATTANLSVR
INEPKSKPIFLIGLIGQDNTIARHGIHGLYNLYDINVGGNLLRVGNNTIFLTQDRRWGSF
TGVMYDYLRLESPPEV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaactaatagctctcgcattcactcttataattctcttcgctgttctcact
gcaataataggtgttcattcccgaacgtcaagaaacaagttaggcatcgcaaagccggaa
cagaagctcgcatctggccggcttacgcttaaaaaagttggtcctaaccaagtggtcgtt
gataacggtatcatccaagttaccttctcaagtccacaaggtttaataactggaatcaag
tacaagggctttgacaatgtgttgaacaacaaaattaaaaatcgtgggtattgggacgta
atgtggtatgaaccaggacaagaacaactaatcgatcttttagaaggagtaaaattcaac
gtcataaatcaaacaagtgagcatgtcgagatttcattttcacgagcttggaagatttct
caacgtggctcactggtcccgttaaatgtagacaaacgatatatcattcgaagaggggta
tctggaatatacatgtacgctgtgttagagaagttaaaaggctggccaactgtggacatg
gaccaaacaaggatcgtcttcaagcttaacacaaaatttgattttatggctatatctgat
caacggcaaaaaattatgccttctgaaatcgaccgagatattactaataagcgtgctaat
ccattagcttataaagaagctgttcgttttgtaaatccccaaaatcgtatatttaaaggg
caggttgacgataagtatatgtattcgatggaaaacaaagacaacaaagtacatggctgg
atctcgtccgaccaacgtgtcggcttctggatgattactcccagcgatgagttccgtgtc
tgtgggcccctcaaacaagaactaacttctcatgttggacccaccacactctccatgttt
acaagtttacattacgcggggaaagatatgaacacaacttatacaagcatggagccgtgg
aagaaggtgtatggtcctgtctttgtttatctcaactctgcctcctctactaatcttctc
tggaccgatgctaaacgacagatggttgaggaggtccatagttggccatatgatttcgtg
aagtcagttgattaccctcttcatcaacaaagagggacggtcaaaggtcaattctttgta
atggacagatacataagcaagtcgaagttatttgggaaatttgcttttgtgggtttagca
gtgcccggtgaagctggttcatggcaaaccgaaaacaagggatatcaattttggacaaca
gcagacagaatggggatattcacaataacgaatgtgagaccagggagttataatctctat
gcatgggtttctggacatattggtgactataaatacgagcgtgacattaccatcacacca
ggcagggagatagacgtaggagccatactgtatgaaccgcccagaatcggcgctacactg
tgggaaatcggaaaaccagaccggactgctgcagagttctatatcccagatccggaccca
atcctttcgaccaaactctatcttaataactcttatcaacctcaagaccgatttagacaa
tatggtctatgggatcggtacactgctttgtatcctcgaaatgatcttgtttatattgtt
ggagtaagtgattataaaaaagactggttctatgcacatgtgaccagaaatgctggaaat
gggacatatcaagcaacgacatggcaaattgtgtttagtttgaaagcagtgattaaaact
ggaaactacacgtttcgaatggctttggctgcagccacgactgcaaatttatctgttcgg
atcaacgagcctaagtccaaacctattttcttgattgggctaataggtcaagataacacg
atcgctagacatgggattcatgggttatacaacttgtatgatatcaatgttggtggaaac
ttacttagggttggtaataatacgatttttctcactcaagatcggagatggggttcgttt
acaggtgttatgtatgattatctacgtctggaaagtcctccggaagtttga
DBGET
integrated database retrieval system
