Brassica rapa (field mustard): 103831653
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Entry
103831653 CDS
T03449
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103831653
Membrane trafficking [BR:
brp04131
]
Protein recycling
Others
EARP complex
103831653
Endosome - Golgi transport
Tethering complex
GARP complex
103831653
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
SPG48
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
103831653
NCBI-ProteinID:
XP_009105798
UniProt:
M4DI22
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All DBs
Position
A07:25264171..25270401
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AA seq
708 aa
AA seq
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MSDGISIDALGQAVGDFSNHEKLGFDLGAYVGDLAFEEDSGSEDISLEGLQQELEECESD
EVVANILSSGAKLREYAKGVENNLRKVELDSIEDYIKESDNLVSLHDQIHDCDSILSQME
TLLSGFQEEIGSISSDIKILQEKSMDMGLRLKNRRVAESKLAKFVEDIIVPPKMIDVIVD
GEVNEEYIRTLEILSKKLKFVAADPAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLI
ALRKPKTNIQILQQSVLLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFRAYIQA
LEKLQLDIATAYDLIGVETRSAGLFSRAREPLKNRSAVFALGERIKIIKEIDQPALIPHI
AEASALKYPYEVLFRSLHKLLMDTATSEYIFCDDFFGEESIFYEIFAGPFSVIDEHFNPV
LTNCFDAIGLMLMIRIIHHHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDSHISSLRD
ANIKTLWEDDVHPHYVMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDVLILKLAKL
FPRPKQQIVFLINNYDMTIAVLKEAGPEGGKIQMYFEELLKSNTSLFVEELLVEHFSDLI
KFVKSRASEDSSLNPERSITVAEVDPLVKDFGSRWKTAIELMHKDIITSFSNFLCGMEIL
RAALTQLLLYYTRLTDCIKKIPGGSGLNKDLVSIQSIMFEIRKYSKTF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggcatctccattgacgcattgggtcaagccgtgggggacttcagtaatcat
gagaaacttggatttgatttgggagcttatgttggagatttggcttttgaagaggattca
ggcagtgaggatatatcattggagggacttcagcaagaactagaggaatgtgagagtgat
gaggttgttgcgaatatactgtccagtggtgcgaaacttagagaatatgctaaaggtgta
gagaacaatctacggaaggtcgagttggattccattgaggattacattaaagaaagtgat
aaccttgtctcacttcacgatcagattcatgactgtgacagcatcttgtcgcaaatggaa
actctcctcagtggatttcaggaagagattggttctataagttccgacataaagattctt
caagaaaaatcgatggacatgggtttgagattgaaaaaccgcagggtggctgaatcaaag
ctagcaaaatttgtcgaagacattatagtgccaccaaagatgatagatgtaattgtggat
ggagaggtgaatgaagagtatattagaacgcttgaaattctgagtaagaaacttaaattt
gtagcagcagatcctgcggttaaaagttccaaagcattaaaagatgtggaacctgagcta
gagaagctccggcaaaaagctatttccaaggtgtatgattttattgtccagaagcttata
gccctaaggaaacccaaaacaaacatccagattcttcaacagagtgtgttattaaagtac
aagtatattatctccttcctcaaagaacatggaaaagaagtgtttatggatgttcgtgct
gcatacattgataccatgaacaaggtgttaagtgcacattttcgtgcttatattcaagct
cttgagaaactacaattggatatagcgacagcatatgacttgattggggtggagactaga
agcgccggtctcttctcaagagccagggagccactaaagaaccgttctgccgtctttgct
ctgggtgagaggataaaaattataaaggaaatcgatcaacctgcattgatcccgcacata
gctgaagccagcgctctcaaatatccttatgaagtgctcttcaggagtttgcacaagcta
cttatggatacagccacttctgagtatatattttgcgatgatttctttggtgaagagtct
atattttatgaaattttcgcgggtccattttccgtcattgatgagcacttcaatcccgtt
cttacaaactgttttgacgctatcggtctgatgcttatgattcgcattatacaccaccat
cagcttatcatgtctcgccggaggattccatgcctagattcatatctggacaaggttaat
atatctttatggcctcgtttcaaaatggtgtttgattcacacatcagcagtctgcgagat
gcaaacataaagacattatgggaagatgatgttcatcctcactatgtcatgaggcgttat
gctgaattcacagcttcgtttattcacctgaatgttgaatatggggatgggcagcttgat
ataaatttggagcgtttaagaatggctgtagatgtcttgattctcaagcttgcaaagttg
ttcccaaggccaaagcagcaaattgtgtttctcataaacaactatgacatgacaatcgcc
gtactgaaggaagctggaccagaaggtggtaaaatccaaatgtattttgaggaattactg
aagagcaacacttcgttattcgtggaagaattactggtggagcatttcagtgatttaatc
aaatttgtgaaatctcgtgcttctgaggattcaagcttaaatccagagagatccatcaca
gttgctgaggtagatccgctggtgaaagactttggaagcaggtggaagacagcgatagag
ttgatgcacaaagatatcataacctccttcagtaacttcttgtgtggtatggagatcttg
agagctgcattgacacaactgcttctctattacacaagacttacggactgcatcaagaag
atacctggtggatctggtctgaacaaggatcttgtctccattcagtctataatgttcgag
atcaggaagtactccaagactttctaa
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