Brassica rapa (field mustard): 103831680
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Entry
103831680 CDS
T03449
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
103831680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
brp03011
]
103831680
Ribosome [BR:
brp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
103831680
Bacteria
103831680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
Motif
Other DBs
NCBI-GeneID:
103831680
NCBI-ProteinID:
XP_009105829
UniProt:
M4DHZ6
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All DBs
Position
A07:25393921..25396193
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AA seq
488 aa
AA seq
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MQTLLIQPSKSLFTSSIHSSGDVRDCIHFKPSEKTSRFQFHIALSPSPFRSFAARRAYGI
RFCSRDGVSDARIVTEEEEEIELLNRPNPQKPDEEEDKEKPDDDEILEPFLKFFKHGERE
EEEGDEESEEMERLTVEYYDPKPGEFVVGVVVSGNENKLDVSIGADMLGTMLTKEILPLY
DKELDYLLCDLKYDAEEFLVHGKMGIVKDEEDDGVEVAEFARQGRPVVEVGTVIFAEVLG
RTLSGRPLLSSRRYFRRIAWHRVRQIKQINEPIEVKITEWNTGGLLTRIEGLRGFIPKQE
LVKRVNSFTELKENVGRRLVVQITRLNEDKNDLILSEKTAWEKRYLREGTLLEGTVAKIL
PYGAQVKLGDSSRSGLLHISNITRRRIGSVSDVLQVDECLKVLVVKSLFPDKISLSIADL
ESEPGLFITNREKVFMEAEEMAKKYRAKMPTVTTRSEITDHPPITSSFPQGKDEEIYANW
DWFKFESQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgcttctcattcagccatctaagtctctcttcacttcctcgattcacagctcc
ggcgacgtcagagactgtatccacttcaaaccatcggagaaaacttctcggtttcagttt
cacatagccctaagcccctctccgtttcgcagtttcgctgctcgaagagcttacgggatc
agattctgctcgcgcgacggcgtctccgatgctcgaatcgtaacggaggaggaggaggag
attgagctattgaacaggcctaatcctcagaaaccagacgaggaggaggataaggagaag
cctgacgatgacgagatccttgagccgtttttgaaattcttcaagcatggagaacgagaa
gaagaagaaggagacgaagaatcggaggagatggagagactcaccgtggagtattacgat
cccaaaccgggtgaatttgtcgttggagttgtggtttcaggtaacgagaacaagctcgat
gtgagtataggtgcggatatgttggggactatgttgacgaaggagatacttccgttatac
gacaaagagttggattacttgctgtgtgatttgaagtacgacgctgaggagttcttggtt
cacggtaaaatggggattgttaaggatgaggaggatgatggtgttgaagttgcggagttt
gcaaggcaagggaggcctgtggtggaggtagggacggtgattttcgcggaggttttgggg
aggacgttgagtgggaggcctttgctttcttctagacgttactttaggagaatcgcttgg
caccgtgtgaggcagattaagcagattaatgagcctattgaagtgaagataactgagtgg
aatactggagggcttcttacccggattgagggtttgagagggtttattccaaagcaggag
cttgtgaagagggtgaatagcttcactgagttgaaggaaaacgtgggtcgtagactggtt
gtgcagattacacggttgaatgaagacaaaaacgacttgatactgagtgaaaaaacagcc
tgggagaagcggtaccttagagaaggaacactcttagaaggaacagttgccaaaatctta
ccatatggagcccaggtcaaactcggggatagtagtagaagtggactgctacacatttca
aacataactcgcagaagaattggatctgttagcgatgtgcttcaggtggacgaatgctta
aaggttcttgttgtgaaatctctatttcctgacaagatctctcttagcattgcagatcta
gaaagcgagccgggtttgttcatcacaaacagagagaaagtgtttatggaggctgaagag
atggcaaagaagtatagagcaaagatgcctacggtgacaacaagaagcgagattactgat
caccctccgattacaagcagcttccctcagggaaaagatgaagaaatctatgctaactgg
gactggttcaagtttgagagtcagtga
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