Brassica rapa (field mustard): 103831712
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Entry
103831712 CDS
T03449
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103831712
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103831712
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103831712
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf-RING_4
YitT_membrane
Motif
Other DBs
NCBI-GeneID:
103831712
NCBI-ProteinID:
XP_009105862
UniProt:
M4DHW6
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All DBs
Position
A07:25538318..25540495
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AA seq
451 aa
AA seq
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MKMMMNRALVLLLLLLFHLLTLSSLASAKVILIRNNITRSFDDIEANFAPSVKAAGEIGL
LYVAEPLDACSDLTNKPEQSSNGTSPFVLIVRGGCSFEDKVRKAQRAGFKAAIIHDNEDR
GILIAMAGNSGGIKIHAVFVTKETGDALKEFAGLSDTKVWLLPSFENSAWSIMAVSFISL
LAMSAVLATCFFVRRHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSVHEDNTTAFTC
AICLEDYSVGDKLRLLPCRHKFHAVCVDSWLTSWRTFCPVCKRDARTANGEPPASESTPL
LSSAASSFRSSSALSSFRSSAMLIGPSMGSLPTSISFSPAHASSSYIRQSFRSSLRRSPP
ISVSRSSMDLRQQGASPSPSQRSYMASPHSFNYPAMSPLNSRYMSPYRPSPSNASPGMIG
SSSNHPLNPLRYSESAGTFSPYASANSLPDC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgatgatgaatcgtgctcttgtcctcctcctcctcctactcttccatctcctc
accctctcttctttagcctcagccaaagtgattctcatcaggaacaacatcactcgctcc
ttcgacgacatcgaagccaacttcgctccgtctgttaaagctgctggtgaaattggattg
ctttacgtggctgagcctcttgacgcttgctctgacttgacgaataagcctgagcagagc
tctaatggtacttccccttttgtgttgatcgttagaggaggttgtagtttcgaagataaa
gtcagaaaagcccaaagagctggtttcaaagctgctattatacatgacaacgaagaccgt
ggaatcttgatagcaatggcaggtaactcgggaggtataaagatccatgcggttttcgtt
actaaagagacgggagatgcgttgaaggagttcgccggtttgtctgataccaaagtgtgg
ctgcttcctagcttcgagaactctgcttggtccatcatggcggtttcgttcatctctttg
ttagcaatgtcagctgttctcgccacttgtttcttcgtccgtaggcataggataagaagg
cgaacgtcacggtcctctagagtcagagagtttcacggaatgagccgccgtttggtgaag
gcaatgccgagtctaatcttcagttcggtgcacgaagacaacactactgcgttcacttgc
gctatctgtttagaagactacagcgttggagacaagctaaggctcttgccttgccgtcac
aagtttcacgcggtgtgtgttgactcgtggctaacctcatggagaacgttctgccccgtg
tgcaaacgcgacgcgagaacggccaacggggagccgccagcttcggagagcacgccgttg
ctctcgtccgccgcgtcgtctttccgatcttcctctgcgctctcttcgttcagatcatca
gcaatgctgatcggtccttccatgggatctttaccgacttcgatctcgttctctcccgcg
cacgcgagctcttcctacatcagacagtccttcaggtcctctctcagacgatctcctcca
ataagcgtgagtcgaagctcaatggatctaaggcaacaaggagcttctccgtcgccgtcg
cagagatcatatatggcttctccgcattcgtttaattaccctgctatgtcgcctctcaac
tctaggtacatgtcaccttataggcctagtccgagcaatgcgtcgcctggaatgatcggg
tcgtcatcgaatcatccgttaaatcctctgcgttatagtgaatcagcagggactttctct
ccttacgcttctgcaaactctctgccagactgttga
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