Brassica rapa (field mustard): 103831844
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Entry
103831844 CDS
T03449
Name
(RefSeq) cyclin-dependent kinase D-1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03022
Basal transcription factors
brp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103831844
09124 Replication and repair
03420 Nucleotide excision repair
103831844
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
brp01001
]
103831844
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brp03021
]
103831844
03019 Messenger RNA biogenesis [BR:
brp03019
]
103831844
03400 DNA repair and recombination proteins [BR:
brp03400
]
103831844
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
103831844
2.7.11.23 [RNA-polymerase]-subunit kinase
103831844
Protein kinases [BR:
brp01001
]
Serine/threonine kinases: CMGC group
CDK family
103831844
Transcription machinery [BR:
brp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103831844
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
103831844
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103831844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Haspin_kinase
Seadorna_VP7
UBA_HYPK
APH
Motif
Other DBs
NCBI-GeneID:
103831844
NCBI-ProteinID:
XP_009106026
UniProt:
M4DHJ7
LinkDB
All DBs
Position
A07:26109097..26116910
Genome browser
AA seq
397 aa
AA seq
DB search
MVDQYSEMDKPKKVADRYLRQEVLGQGTYGVVFKATDTKNGQTVAIKKIRLGKEKEGVNI
TALREIKLLKELKHPHIIELVDAFPHKENLHLVFEFMETDLEAVIRDPNLFLSPADVKSY
LQMTLKGLEYCHDKCVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPGRKFTHQVFTRW
YRAPELLFGSKHYGSAVDVWAVGCIFAELLLRKPFLQGKSDIDQLSKIFAAFGTPKEDQW
PDMLSLPDYVEYQFVPGASLRSLFPMVSEDGLDLLSKMFTYDPKSRISIQQALNHRYFTS
APSPTDPLKLPRPVRKQDAKSSESKLKTITVLSPAHKLRRVMPDRGKSTDVMKQASHDGQ
APMSLDFTILAERPPNRLTITSADRSNLKRKLDLEFM
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcaatacagtgagatggataagccaaagaaagttgctgataggtatctgagg
caagaagttcttggccaaggcacttatggagtcgtcttcaaagctactgatactaagaac
ggacaaactgtagcgatcaagaagataagacttggtaaagagaaagaaggtgtgaacata
acagctctaagagaaatcaaattactcaaagagcttaaacatcctcatattatagagttg
gttgatgcctttcctcacaaagagaacttgcaccttgtgtttgagttcatggagactgac
ctagaagcagttatccgagatcctaatctctttctctccccagctgacgtcaaatcttac
ctccaaatgacattgaaaggtcttgagtattgccatgacaaatgtgttttgcacagagat
atgaagccgaacaacttgttgataggacccaatggacaactaaaactcgcagactttggg
ttagcacgtatatttggtagtccaggtcgtaagtttacacaccaggtctttactagatgg
tatagagcacctgagcttctgtttggttccaaacactatggttctgctgttgatgtttgg
gctgttggctgtatcttcgccgagcttctattacgcaaaccttttcttcagggaaaaagt
gatattgatcagttaagtaaaatctttgctgcctttgggactcctaaagaagatcagtgg
ccagatatgttatcacttcctgattatgtagagtatcagtttgtccctggggcgtctcta
cgttctttattcccaatggttagtgaggatggtctagatttgttgtcaaagatgttcact
tatgatcccaagtctagaatatcgattcaacaggctttaaaccacaggtacttcacatct
gcaccttctcctactgaccctttaaagctaccaagaccagttcgaaagcaggacgctaaa
tcatctgagagtaaactcaaaactattacggtgttgtcaccagcacataagcttagaaga
gtgatgcctgaccgaggaaagagtacggatgtcatgaaacaagctagccatgatggacaa
gcacctatgtctttagatttcaccatactagccgagcggccaccaaaccgactaaccatt
accagtgcggatagatctaatctgaagaggaaactcgatcttgagttcatgtag
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