Brassica rapa (field mustard): 103831847
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Entry
103831847 CDS
T03449
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g73710
Organism
brp
Brassica rapa (field mustard)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
ECSIT_N
TPR_19
Clathrin
DUF6648
Motif
Other DBs
NCBI-GeneID:
103831847
NCBI-ProteinID:
XP_009106029
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All DBs
Position
A07:26120891..26124303
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AA seq
975 aa
AA seq
DB search
MLHPNCYRHYTSSRDVPSSSFFLTSRSRVSLPWNFSPKVSTRFQLHCSSSSSSSPPRCSK
PNSNSRHHHRRYGGVIPSILRSLSSSADIETTLTSLCLNLTPKEQTVLLKEQTRWDLTLR
VFRFFQRHHQGGYSPNVIHYNIVLRALGRAAKWDELRLCWLEMSRSGVLPTNNTYGMLVD
VYGKAGLVKEALLWIKHMEQRSHFPDEVTMATVVRVLKNSNEFDSADRFFKGWCEGRVDL
DLDSIDNDDPMNLKQFLSMELFKVGARGPVERTSNSSSSSSPRKPRLTSTFNALIDLYGK
AGRLEDAASLFSEMLKSGVAVDTVTFNTMIHICGTHGRLLEAEALLKKMEEKGVNADTKT
YNILLTLHAEGGDIEAGLRYYRKIRRVGLFPDTVTHRAVLHVLCQRKMVKEVEDVLAEME
RNNIRIDEHSVPVIMEMYVNEGMIGKAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVE
AEGVFYGKRRSVMNDVLVYNVMIKAYGMAKLHEKALSLFKGMKNQGTWPDECTYNSLVQM
LSGSDLVDEAQRVLSEMVDSGCKPGCKTFSSLIASYVRLGLLSEAVDVYEEMRKAGVKPN
EVVYGSLINGFAESGMVEEAIQYFKTMEEDGVKSNQIVLTSLIKAYSKVGCLEEARRVYD
RMKKDTEGGPDVAASNSMLSLCAELGMVSEAETIFNDLREKGTCDVITFATMMYLYKGMG
MLDEAIEVAEEMRESGLLNDCVSFNQVMACYAADGQLRECCELFREMLVERKLSLDWGTF
KTVFTLLKKGGVPREAVEQLQAAYNEGKPLATSAITATLFSAMGLYAYAMDSCKEITRDE
IPLEHYAYNAVIYAYGASGEVDMALKTYMRMQEKGLKPDIVTQAYLVGVYGKAGMVEGVK
RVHGWITFGELEANQSLFRAVRDAYVSANRRDLADVVKKEMSIAFEDGQEEEFSSISGEE
EEEDDDDESEEDEAF
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacccaaactgttatcgtcactacacttcctcaagagacgtaccttcctcttcc
ttcttccttacatctcgctctagggtctcacttccttggaacttctctcctaaggtctcc
actcgcttccaactccactgctcctcctcttcttcttcctctccaccaagatgctctaaa
cctaattctaactcccgccaccaccaccgccgctacggcggcgtaatcccatccatcctc
cgctccctctcctcctccgccgacatcgaaacaactctaacctccctctgcctcaaccta
acccccaaagaacaaaccgtcctcctcaaggaacaaacccgctgggacctaaccctccgc
gtcttccgcttcttccaacgccaccaccaaggaggctactcccccaacgtcatccactac
aacatcgtcctccgcgccctggggagagccgccaaatgggacgagctccgcctctgctgg
ctcgagatgtcccgcagcggcgtcctccccactaacaacacctacgggatgctcgtcgac
gtctacggcaaagcgggtctcgtaaaggaagctcttttatggatcaaacacatggagcag
aggtcgcacttccctgacgaagtcaccatggctactgttgtaagagttttgaaaaactct
aacgagtttgatagtgctgataggttctttaaaggttggtgcgagggccgtgtcgatctt
gatttggactccattgataacgatgatcctatgaacttgaagcagttcttgtccatggag
ctctttaaagtcggtgcgagggggcctgttgagagaacctccaactcttcttcttcttct
tctccgaggaagccgaggttgacttctactttcaacgcgttgattgatttatacgggaag
gcggggaggttggaggatgcagctagcctcttctctgagatgttaaagtctggagttgct
gttgatacggtgacgtttaacacgatgattcatatatgcgggactcacgggcgtttgtta
gaggctgaagccttgttaaagaagatggaggagaaaggagtgaacgctgataccaagact
tacaacattcttttaactcttcacgctgagggtggagacatcgaggctgggcttagatac
tataggaagatcaggagagtggggctgtttcctgataccgtgactcaccgagctgttctt
catgtattatgtcagaggaagatggttaaggaggttgaagatgtgttggctgagatggag
aggaataacattcggatcgatgagcattctgttcctgtaattatggaaatgtatgttaac
gaagggatgatagggaaagcgaaagctttgttcgagaggtttcagctggactgcgtgctg
tcatcgaccacgcttgccgcggttatcgatgtctacgctgagaagggactgtgggttgaa
gcggagggtgtgttctacgggaagaggaggagcgtgatgaatgatgttttggtgtataac
gtcatgattaaagcttatggtatggcgaagcttcatgagaaagcgctttctttgttcaaa
gggatgaagaaccaagggacttggcctgatgagtgtacttacaactcccttgtacagatg
ctctccgggtctgacttggttgatgaagctcagagggtcttgtccgagatggtggattcg
gggtgtaaaccggggtgcaagaccttttcttctttgatcgctagctacgtccggcttgga
ctgttgtctgaagctgttgacgtctacgaggagatgaggaaagctggtgtgaagccgaac
gaggttgtttacggttcgttgattaacggatttgctgagagtgggatggtggaagaagcg
attcaatactttaaaacgatggaagaggacggtgttaagtctaatcagattgttctaacg
tcacttatcaaagcttatagcaaagtagggtgtcttgaggaagctaggagagtttatgac
aggatgaaaaaggatacagaaggtggtcctgatgttgctgcgtcgaacagcatgctgagc
ctctgcgcggagctcggcatggtgtcagaggcggaaactattttcaacgatctcagagag
aaaggcacgtgcgacgtgatcacctttgccacgatgatgtacttgtacaaaggcatgggg
atgcttgatgaagctatagaagtggctgaggagatgagggagtctggtttactaaacgac
tgcgtttcgtttaaccaggtgatggcttgctacgctgcggacgggcagctgcgcgagtgc
tgcgagctgttccgcgagatgctggtcgagagaaagctctccctggactggggaacgttc
aagacggtgttcacactgttgaagaaaggcggcgtgccgagggaagctgtggagcagctg
caagcagcttacaacgaaggtaaaccgctcgccacgtcggcgattaccgcaacgttgttc
tcagccatggggttgtatgcgtacgcgatggattcgtgtaaagagatcacgagagatgag
attcctttggagcattacgcgtacaacgcggtgatatacgcttacggtgcgtcgggggag
gttgatatggctttgaagacgtatatgaggatgcaggagaaggggttgaagccggatatc
gtcacgcaggcgtaccttgttggggtgtacgggaaagcagggatggtggagggcgtgaag
agggtgcatggttggataacgtttggggagcttgaagcgaaccagtcgttgtttagagcg
gtgagggatgcttatgtgagtgcgaataggcgggatttggctgatgtggtgaagaaagag
atgagcattgcttttgaagatggtcaagaggaggagtttagttcgatctctggagaagaa
gaagaagaagatgatgatgatgaatccgaagaagacgaggcgttttga
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