Brassica rapa (field mustard): 103832082
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Entry
103832082 CDS
T03449
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103832082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103832082
03041 Spliceosome [BR:
brp03041
]
103832082
03032 DNA replication proteins [BR:
brp03032
]
103832082
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103832082
Spliceosome [BR:
brp03041
]
Complex A
U1 snRNP components
Sm proteins
103832082
U2 snRNP components
103832082
Complex B
U1 snRNP components
103832082
U4/U6.U5 tri-snRNP components
103832082
Complex C
U2 snRNP components
103832082
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103832082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103832082
NCBI-ProteinID:
XP_009106286
UniProt:
A0A397YS30
LinkDB
All DBs
Position
A07:27140648..27160559
Genome browser
AA seq
127 aa
AA seq
DB search
MSRSLGIPVKLLHESSGHTVTVELKSGELYRGNLLECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFIVIPDMLKNAPMFSRANAKIKGKSSIGVGRGRPAMRGRGTGRGTGGRG
GAPPVRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcttggggataccagtgaagcttcttcacgagtcgtcggggcatacagtg
acggtggagctgaagagcggcgagctgtacagaggaaacctgctcgagtgtgaggataac
tggaactgccagctcgagaacatcacctacaccgccaaggatggtaaggtatcacagctt
gagcatgtcttcatcagaggcagcaaagtcaggtttatagtgataccagacatgctgaag
aatgctccaatgttcagccgagcaaatgctaaaatcaagggaaagagctcaataggtgta
ggcagaggtagacctgcaatgcgaggcagaggtactgggcgtgggacaggaggaagggga
ggcgcaccacctgtgaggagataa
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