KEGG   Brassica rapa (field mustard): 103832158
Entry
103832158         CDS       T03449                                 
Name
(RefSeq) F-box protein SKP2B isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103832158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103832158
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     103832158
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_NXF1-5 LRR_At1g61320_AtMIF1 Sulfolobus_pRN
Other DBs
NCBI-GeneID: 103832158
NCBI-ProteinID: XP_009106367
LinkDB
Position
A07:27503739..27506199
AA seq 384 aa
MFLLNKNEVKKKKTGPNVSQKKSRNRLTEMMSEGGSLNRCFEKMEGNMITEWKDIPVELL
MRILNLVDDRTVIIASGVCSGWRDAISFGLTHLSLSWCKKDMNSLVLSLAPKLVKLQTLV
LRQDKPQLEDNAVEAIANHCHELQDLDLSKSLKLTDRSLYSLARGCNNLTKLNLSGCTSF
SDTALAYLTRFCRKLKVLNLCGCVEAVSDNALQAIGENCSQMQSLNLGWCEKISDDGVMS
LAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKN
KHEMWRSVKKGKFDEEGLRNLNISQCTYLTPSAVQAVCDTFPALHTCSGRHSLVMSGCLN
LTSVHCACILQAHRTHTALPHPAH
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgtttttgctgaacaaaaacgaagtgaagaaaaaaaagactggtcctaacgttagtcaa
aagaaatcaagaaaccgcttaaccgagatgatgagtgaaggaggatcacttaaccgatgc
ttcgagaagatggaaggaaacatgatcaccgagtggaaagatatccctgtggagcttctc
atgaggatccttaacctcgttgatgatcggacggtaatcattgcttctggtgtttgctct
ggctggagagatgctatctcctttggtctcacccatctctctctctcatggtgcaagaaa
gacatgaacagtttggttctgtctctcgctccaaaactcgtcaagcttcagactctagta
ctaagacaagacaaacctcaactcgaagacaacgcagtcgaagccatagcgaatcactgc
cacgagctacaagatcttgaccttagcaaaagcttgaaactcaccgaccgttccctctat
tctctagctcgcggttgcaataacctcactaagctcaacctcagcggctgcacttcgttc
agcgacaccgctcttgcgtacttgacaaggttttgtcggaagcttaaagttctgaatctt
tgtggttgtgtggaagctgtatccgataatgctttgcaggctattggagagaactgtagt
cagatgcagtcactaaacttgggatggtgtgagaagataagtgatgatggagtcatgagt
ttagcttatggctgtcctgatctgagaagccttgatctctgtggctgtgtacttattaca
gatgagagtgtggtggctttggctaatcgttgtgtacacttaaggtcattggggctatac
tattgcagaaacataaccgacagggccatgtactcgctggctcagagcggagtgaagaac
aaacacgagatgtggagatcggttaagaaaggaaaattcgacgaagaaggactaagaaac
cttaacattagccaatgcacttacctcacaccttcagcggttcaagcggtctgcgatacg
ttccctgcgctccacacttgttcaggcaggcattcacttgtcatgagcggttgtctgaat
ttaacatcggttcactgtgcttgcatccttcaggctcaccgcacacacacagctttacct
cacccggctcattga

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