Brassica rapa (field mustard): 103832329
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Entry
103832329 CDS
T03449
Name
(RefSeq) solanesyl diphosphate synthase 1, chloroplastic
KO
K05356
all-trans-nonaprenyl-diphosphate synthase [EC:
2.5.1.84
2.5.1.85
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00900
Terpenoid backbone biosynthesis
brp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103832329
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
brp01006
]
103832329
Enzymes [BR:
brp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.84 all-trans-nonaprenyl diphosphate synthase [geranyl-diphosphate specific]
103832329
2.5.1.85 all-trans-nonaprenyl diphosphate synthase [geranylgeranyl-diphosphate specific]
103832329
Prenyltransferases [BR:
brp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103832329
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
103832329
NCBI-ProteinID:
XP_009106560
UniProt:
A0A397YZB2
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Position
A07:complement(28060314..28063024)
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AA seq
419 aa
AA seq
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MMMTSCRNIDLGTSVLDLISCGCGRRQFLLGNFPKAVCTARSYGGRNLVFLRRDVGRSCK
AVPTKPKEISLVNGIGEAKTVSFDLRQETSSKQPISLANLFEVVADDLQTLNDNLLSIVG
AENPVLISAAEQIFGAGGKRMRPGLVFLVSRATAELAGLKELTTEHRRLGEIIEMIHTAS
LIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIK
DFASGEIKQASSLFDCDVTLEDYLLKSYYKTASLVAASTKGAAIFSRVDTDVTEQMYEFG
KNLGLSFQVVDDILDFTQSSEQLGKPAGSDLAKGNLTAPVIFALEKEPRLREIIESEFCE
EGSLEEGIELVREGGGIRRAQELAREKADEALKNLQCLPQSGFRSALEEMVMFNLERID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacatcttgtcggaatattgacttgggtactagtgttcttgatctgatctcg
tgtggctgtggtcgtcgtcagtttctattaggcaactttcccaaggctgtttgtacggcg
agaagctacggcggtcggaatctggtgtttctccggcgtgacgtggggaggagctgcaaa
gctgttccgacaaaacccaaagagatctctttggtcaacggaataggtgaagccaaaacg
gtgagttttgatttgaggcaagagacctcctcaaagcagcccatttcgttggcgaatctg
tttgaggttgtagctgatgatcttcagacgttgaatgataatcttttatcgattgttggt
gcagagaatccggttttgatatctgcagctgagcaaatcttcggagctggtggtaaaagg
atgagacccggtttagtgttccttgtttcacgagccactgcagagctagctggcctaaag
gaacttacaacggaacataggcgtttaggtgagatcattgagatgattcacactgcaagc
ttgatacatgatgatgtgttagatgagagtgatatgcgcagaggtaaggaaacagttcac
gagctttttggcacgagagtagctgtactagctggtgatttcatgtttgctcaagcatca
tggtacttagccaacctcgagaacctggaagttatcaagctcataagtcaggtgatcaaa
gactttgcgagcggagagataaagcaagcctcgagtctgttcgactgtgacgttactcta
gaagactacttgctcaagagttactacaagacagcctcgctggtggccgcaagcaccaaa
ggagctgctatcttcagcagagtcgataccgatgtgacagagcagatgtacgagttcggg
aagaatctcggcctctctttccaagtggtcgacgacattttggacttcactcagtcgtca
gagcagctagggaagccagcagggagtgatctggctaaaggtaacttaaccgcgcctgtg
attttcgcgctggagaaggagccgaggctgagagagatcatagagtctgagttctgcgag
gagggttctctggaagaagggattgagttggtgagagaaggcggtggaatcagaagagcg
caagagttggctagggagaaagctgatgaagctttgaagaatctgcagtgtttgcctcag
agtggcttcaggtcggctctagaagaaatggtgatgtttaatcttgaaagaatcgattag
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