Brassica rapa (field mustard): 103832335
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Entry
103832335 CDS
T03449
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00541
Biosynthesis of various nucleotide sugars
brp01100
Metabolic pathways
brp01250
Biosynthesis of nucleotide sugars
Module
brp_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
103832335
Enzymes [BR:
brp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
103832335
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
DUF4942
Motif
Other DBs
NCBI-GeneID:
103832335
NCBI-ProteinID:
XP_009106565
UniProt:
M4F1V1
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Position
A07:28073379..28076344
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AA seq
670 aa
AA seq
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MASYTPKNILITGAAGFIASHVANRLIRTYPHYKIVVLDKLDYCSNLKNLNPSKNSPSFK
FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQVRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGKVLPIHGDGSNVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTKKERRVNDVARDVCKLFGMDPEASIKFVENRPFNDQRYFLDDEKLKKL
GWSERTTWEEGLKKTMEWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSDEISSAASV
SDKPSQTHMVVPSTRSSTSTPQKPSLKFLIYGKTGWIGGLLGKLCEKQGIAYEYGKGRLE
DRASLLQDVMSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLL
MMNFATGCIFEYDEKHPEGSGVGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVR
MPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVV
SHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLI
KYAFEPNKKT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtacacgcccaagaacattctcataaccggagccgccggtttcatcgcctcc
cacgtggcgaacaggctcatccgaacctaccctcactacaagatcgtggtcctcgacaag
ctcgactactgctccaacctcaagaaccttaacccttcgaaaaactcccccagcttcaag
ttcgtgaaaggcgacatcgccagcgccgacctcgtcaaccacctcctcatcaccgaaggc
atcgacaccatcatgcacttcgccgctcagacccacgtcgacaactccttcggcaacagc
ttcgagttcaccaagaacaacatctacggtacccacgtcctcctcgaggcctgtaaggtg
acaggccaggtgcggaggtttatccacgtgagtaccgatgaggtctacggggagactgac
gaggacgcgctcgtgggtaaccacgaggcctctcagcttctccccacgaacccttactct
gcgaccaaggctggcgcggagatgcttgtgatggcgtatgggcgatcttatggtttgcca
gttattactactcgtgggaacaatgtttatgggccgaatcagtttcctgagaagctgatt
ccgaagtttattttgctggcaatgagagggaaggttcttccgattcacggagatgggtcg
aacgtgaggagttatctttactgtgaggacgttgctgaggcctttgaggtgattctccac
aagggggaggttgggcatgtttataacattgggactaagaaggagaggagagtgaacgat
gtggctagagatgtttgcaagctctttggcatggaccctgaggcgagtattaagtttgtt
gagaaccggccttttaatgatcagaggtattttctcgacgatgagaagctgaagaagctg
gggtggtcggagaggacgacgtgggaggaagggttgaagaagactatggagtggtatact
cagaaccctgagtggtggggtgatgtctctggagctttgcttcctcatccgaggatgctg
atgatgcccggtgggcgacatttcgatggatcagatgagatttcttcagcagcttcggtg
tctgacaagccgagtcaaacccacatggtggttccaagcacaaggagcagtaccagcacg
ccgcagaagccttctctcaagttcttgatatatggtaaaaccggatggattggtggtctg
cttgggaagctatgtgagaagcaagggattgcttatgagtatgggaaagggaggttggag
gatagagcttctcttttgcaggatgttatgagtgttaagccgactcatgttttcaactcg
gctggtgtgactgggagacctaatgttgactggtgtgagtctcacaagacagagaccatc
cgtgccaatgttgctgggactttgactctggctgatgtctgcagagagcatggccttttg
atgatgaacttcgctactggttgtatatttgagtatgatgagaagcatcctgaaggttcg
ggtgttggattcaaggaggaagacactcccaacttcactggctccttctactcaaaaacc
aaagccatggtcgaggagctgctaaaggagtatgacaacgtatgcacattgagggtaagg
atgccaatctcttcagatctaaacaacccacgcaacttcatcaccaagatctcaaggtac
aacaaagtagtcaacatcccaaacagcatgacagtgttggacgagctcttaccaatctcc
atcgagatggccaaaagaaacttgaaagggatctggaacttcacaaacccgggcgtggtg
agccacaacgagatcctagagatgtacagagactacatcaaccctgagttcaaatgggca
aacttcacgttagaggagcaagctaaagtcattgtagctccaagaagtaacaacgagatg
gatgcttctaagctcaagaaagagttccctgagctactctccatcaaggagtcgttgatt
aagtatgcatttgagccaaacaagaagacttga
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