KEGG   Brassica rapa (field mustard): 103832403
Entry
103832403         CDS       T03449                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103832403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103832403
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103832403
SSDB
Motif
Pfam: TPR_MLP1_2 XLF_CC
Other DBs
NCBI-GeneID: 103832403
NCBI-ProteinID: XP_009106649
LinkDB
Position
A07:complement(28324609..28337637)
AA seq 2091 aa
MPLFMPDDELARLSSDAASVVAERADEYIRKLYAELDSVRAKADAASITAEQTCSLLEQK
YLSLSRDFASLESQNAQLQSDLDGRLAELAQSQAEKHQLHLQSIEKDGELERMTTEMSEL
HKSKRQLMELLEQKDAEISEKNSNIKSYLDKIVKLTDANSEKESRYAEAGAELARSQAMC
SRLSQEKELMERHTKWLDEELTAKVDSYAELRRRHSDLEAEMSAKLVDVEKNYNECSSSL
NWHKERLRELEAKITSLQEELSSCKVAAATMEEQYNAELSTANKLVELYKESSEEWSRKA
GELEGVVKALEARLIQVESGYKDSLEKEMSTNQQLEKENEDLKQKLEKLEAEIEKTRKTN
ELTLLPFSSFTRGADDSGTSNMIEESHAIISKVPAGVSGTALAASLLRDGWSLAKIYEKY
QEAVDAMRHEQLGRKEAELILQRVLSELEEKAEFIQEERGEHERLVEAYSLVNQKLQDSV
SEQSNMEKYIMELKADLRRRERENILSQKDISDLQKQVTILLKECRDVQLRCGAARDDEE
DDAQLSDVEMEMESEADKIISEHLLKFKDINGLVEQNVKLRNLVRSLSEQIESREMELKE
MFETELKKKTDEASSKVAIVLKRAEEQGQMIESLHTSVAMYKRLYEEEQKRYSSNSRSSD
LPPVPGRNNFLHLLEDSQEATKRAQEKTVERIRSLEDDLAKARSEIIAIRSERDKLAMEA
NFVREKLEGIMKESERKREEMNGVLARNIEFSQLIIDHQRKLRESSESLHAAEDISRKLS
MEVSVLKQEKEVLSNAEKRASDEVSTLSQRVYRLQATLDTIQSTEEVREEARAAERRKQE
EHIKQLEKEWAEAKKELQEERSNSRNSTSDRNQTLNNAVMQVEEMGKELANALKAVSAAE
SRASVAEARLSDLEKKIRSSDPKGLDMDSGGVVSLSDNEMSVELRTAKEEMEKLRGDVES
SKSHMLQYKSIAQVNEIALKQMESAHENFRLEAEKRQESLEAELVSLRERVSELENDCLQ
KSEQITNAAAGKEDALVSASAEIASLREESLVKSSQIEAMNIQMSTMKDDLGKEHEKWCV
AQRNYERQVILQSETIQELTKTSQALASLQEEASELRKLADSRGTEISELNSKWSEEKCM
LEQQKNQAEKMYHELNEQNKLLHSRLEAMHLRSAEKDSRSGNLSSGSIDSDQLGDSGLQS
VVNYLRRTKEIAETEISLMRQEKLRLQSQLESALKMAESARGSLNAERASTRASLLTEDE
IKSLQLQVSEVNLLRESNMQLREENKHNFEECQRLREVAQKAKTDSENLENLLKQKQTEL
DLCISEMERLRKESDLEKKRVDELRETYKNIDVADYNRLKVEVRQLEEKLKAKDNHIEGF
KKLLLEKQNKISQLEKDLTNCKNDLSEREKDLTRCKAELSEKEKTLDSSQQAQATMESDS
EKLKAEITRVKRSYTFMKKKLEKERDDLNSDNQSLSKQLEEAKEAGKRTTTDATVEQAVK
ERDEKEQKIQILDKYLHSLKDDLKKKDDELTKEKTERKSVEKVLEDSLANIKKEKTKVDE
ELVKLERYQTALANLSEELDKLKQADGNLPEGTSAVQVLSGSVLNDQAAAYVSAVDSFER
VARTFVLNSQGSTKSTDMVTEASPATVEPSATARASSSKAPVATTQQQLKVKRLTLQKPN
AELRRGRIIRPQLGKPEEPPQVDTEMPEAEGAGGEGKQPSSNVTESQGTTVVPPVQTHVR
KRQADSLASEPPQATQGEASTEIVPPAFKKAKGSETEPDTAEGENLSKEPDMDETMDATN
AAEDDNEETEAETADEETMEAQQETEAEEGQDKTDEPVEENPTKTETIPTEEEFKDQTEQ
ENQDLADAEFDKEEGELDLDTLEDLEEPTDVATTPMQSPIRMETTMEEAETTIEPPLEDV
KNDEGGDVAVEEASDKPNNGNNQQVAETDLKPETTSASATPPTSSTPETEETKRNRSQVA
ETTVATTVSASTTPASAGASETPETSEETKRAASPSRTINIADKAKEKAAIRQAGVAALG
GTRTPSPANRAPSPPAPRGRGRIVNTRGGGRVNSRGGRTTRGGRGPPPSQP
NT seq 6276 nt   +upstreamnt  +downstreamnt
atgcccttgtttatgcccgacgacgagctcgcgcggctctccagcgacgccgcgtcggtg
gtcgccgagcgagccgacgagtacatccgcaagctctacgccgagctggacagtgtccgc
gccaaggccgacgccgcttccatcacggcggagcagacgtgctcgcttctcgagcagaag
tacctctcgctctctcgcgatttcgcgtcgcttgaatctcagaacgcgcagcttcagtcc
gatctcgacggtagattggctgagctcgcgcagtctcaggcggagaagcaccagcttcat
ttgcaatcgattgagaaggatggagagttagagaggatgacgacggagatgtctgagctt
cacaagtccaagaggcaactcatggagttactggagcagaaagatgctgagattagcgag
aagaattcgaatatcaagagctatctggataaaatcgttaagctgactgacgccaattcg
gagaaggagtctagatatgctgaagcaggagcagagttggcgcgttcgcaagctatgtgc
agtcgtttatctcaggagaaagagctcatggagaggcatacgaaatggcttgatgaggag
ttaacagccaaagttgatagttatgctgaactccgtaggaggcattctgatcttgaggct
gaaatgtctgcgaagcttgtcgatgttgagaaaaattacaatgagtgctctagttcgttg
aattggcataaggaaagactgagagagctggaagctaagattacttcactacaagaggag
ctcagctcgtgcaaagttgcagcagcgaccatggaagagcaatacaatgctgaactttct
actgcgaacaagcttgttgagctgtacaaggaaagttcggaggagtggtccagaaaggcg
ggtgaacttgagggtgtcgttaaggccttagaggcacgcttgatccaagtcgagagtggg
tacaaagatagtcttgagaaagaaatgtctacaaaccagcagctagagaaggagaacgaa
gaccttaaacaaaaacttgagaagcttgaagcagaaattgagaaaactaggaaaacaaat
gagctaacgcttttacctttcagcagtttcacaagaggggcagacgattcagggaccagc
aacatgatagaggaaagccatgcaataatttctaaggttcctgctggtgtgtcaggaacg
gcgctggcagcttcactcttacgtgatgggtggagtttggccaaaatttatgaaaagtat
caagaggctgttgatgcaatgagacatgagcaattaggtcgaaaggaagctgagttgata
ctacaacgggttttatcggaattagaagagaaagctgagtttatccaagaggaaagaggt
gagcatgagcgtttggttgaagcttattcactagtcaatcaaaaacttcaggattctgta
tctgaacaatcaaatatggagaagtacatcatggagctaaaggctgacttgaggagacgg
gaacgtgaaaatattctatctcagaaagatatatccgacttacagaagcaggtaacgata
ctactgaaggagtgccgtgatgtccaactccgctgtggagctgccagggatgatgaagaa
gatgatgctcagctttctgatgttgagatggaaatggaatctgaagctgataaaattatt
tcagagcatcttttgaagtttaaagatataaatggactagttgagcagaatgttaagctc
cgaaaccttgttcgtagtctctcagagcagattgaaagtagggaaatggagctgaaggaa
atgtttgagacagagctgaagaaaaagactgatgaagcttcttcgaaagtagccatcgtg
ctcaaaagagctgaagagcagggtcaaatgattgaatcacttcacacatctgttgcaatg
tataaacgactatatgaagaggaacagaaacgttattcatctaattctcgttcatcagat
ttgcctccagtgccaggaaggaataactttttacatctgcttgaagattcacaggaagct
acgaaaagagcccaagaaaaaactgtcgaacgcatccgaagtctggaagacgatttagcg
aaggctaggagtgagataatagcgataaggtctgaacgggataagttggccatggaggca
aattttgttagggaaaaactagaaggcatcatgaaagaatctgaacgcaagagagaagaa
atgaacggtgttttggcaagaaacatagagttctcgcagctgatcatcgatcaccaaagg
aagttacgtgagagttctgagtctctgcatgcagcggaagatatttctagaaaattatca
atggaggtttcggttctaaaacaagaaaaagaagtgttatccaatgctgaaaaacgagct
tctgatgaagtttctactctatctcagagagtttatcgtcttcaggctaccttggatact
atacagagtacagaggaagttcgtgaggaagcaagagctgctgagagaaggaaacaagag
gagcatatcaagcaacttgagaaagaatgggctgaagctaaaaaagaattgcaagaagaa
aggagcaattcgcgaaatagcacttcggaccgcaatcaaactttgaacaatgctgttatg
caggtcgaagaaatgggaaaagaattggctaatgccttgaaggctgtctcggcagcagaa
tcaagggcttctgtggctgaggctagactttctgatttggagaagaagataaggtcttca
gatcctaagggccttgatatggacagtggtggagtcgtctctctttctgataatgagatg
tccgtagaactgcgtactgcaaaggaagaaatggaaaagttgaggggagatgtagaatct
agcaaaagccacatgcttcagtacaagagtatagcccaggtgaacgaaattgctttaaag
caaatggaatcagcccatgagaacttcagacttgaggctgaaaagagacaggaatcgttg
gaagcagagcttgtttctcttagggaaagggtgtcagaacttgaaaacgactgtctacaa
aaatctgagcagataaccaatgctgctgcaggaaaagaagatgctcttgtatcagcatca
gctgaaattgcgagtctgagagaagaaagcttagttaaaagttcccaaatcgaagcaatg
aatatccagatgtccactatgaaggatgacttagggaaggaacatgaaaaatggtgtgtt
gctcagagaaattatgaaagacaggttattctgcagtctgaaactattcaagagctgacg
aaaacatcgcaggctttggcttcccttcaagaggaggcatctgaactacgtaaattggct
gattcaaggggaacggaaatttccgagcttaactccaagtggagtgaagagaaatgtatg
ctagagcagcaaaagaatcaagcggagaagatgtatcatgaacttaatgaacagaacaaa
ttactgcatagccgacttgaggctatgcatcttcgctcggctgagaaagatagccgttct
ggaaacctatcatctggaagcattgactcggatcaacttggagattctggtttgcaaagt
gtagtcaattatttgcgcagaacaaaggaaatagctgaaacagaaatatcacttatgaga
caggaaaaattacggttgcaatcgcaacttgagagtgccttgaagatggcagaatctgcc
cggggttcacttaatgctgagcgtgccagtacaagggcctcattattgactgaggatgaa
atcaaatctcttcagctccaggttagtgaggtgaacttgctccgtgaaagcaacatgcaa
ctcagggaagaaaacaaacacaacttcgaggagtgccagagattgcgtgaggtagcccaa
aaggctaagacggattccgaaaacttggaaaatctattgaagcaaaagcaaaccgagtta
gacttgtgtataagcgagatggaaaggctaaggaaggagtccgatcttgaaaaaaagagg
gtggatgagttgagagagacttataaaaacattgatgttgctgactacaatcgcctcaaa
gttgaagtgcggcaactcgaggagaaactgaaagcgaaagataatcatattgaaggtttc
aagaagcttctgttagagaagcagaataagatatcgcaactagagaaggatctaacaaac
tgtaaaaacgatctgagtgagagggagaaggatctaacaagatgcaaagccgaactgagt
gagaaggagaaaacgttagactcttctcagcaagcacaggcgactatggagtcagactct
gagaagctgaaagcagagatcacaagggtcaagagatcttataccttcatgaagaaaaag
ctcgaaaaagaaagggacgatttgaacagtgataatcagtcactctctaaacagttagag
gaagccaaagaggctggaaagagaacaacaactgatgctacggtggagcaggccgttaag
gagagagatgaaaaagaacaaaaaattcagatattggataaatatcttcattcactgaaa
gatgacctgaagaagaaggatgacgaattaacaaaagagaaaacagaacgcaagtctgtt
gagaaggtacttgaagactccttggccaacattaaaaaggagaaaacaaaagtggatgaa
gagcttgttaagctcgagaggtatcagacggcattggctaacctctctgaagaattggac
aaattgaagcaggcggatggaaatcttccagagggtacttcagctgtccaggttctctct
ggaagcgtattgaatgaccaagccgctgcctacgtatcagctgttgactcttttgagcgc
gtggctcgtacttttgtcctcaattctcaaggtagcaccaaatctaccgatatggttact
gaagcttcccctgctacagttgagccttcagccactgccagagcttcttcgtcaaaagca
ccggtggcgactacgcagcagcaactcaaagtgaagagattgactttgcagaaaccaaac
gctgaactccgcagagggaggattattcgtccccagcttggcaaaccagaggaacctccg
caagttgatactgagatgccagaagctgaaggagctggtggtgaaggaaaacagccttcc
tccaatgtcacagagagtcaaggaaccactgttgtgccgcctgttcagacacatgtccgt
aaacgccaggccgattcgttggcttctgagccaccgcaagcgactcaaggggaagctagt
accgagattgtaccacctgcgtttaagaaggcaaaaggatcggagacagaaccagatact
gccgaaggtgaaaatctctctaaagagccagacatggatgaaaccatggatgctaccaat
gctgccgaagatgacaatgaagaaacagaagctgagactgcagatgaggaaactatggaa
gcacaacaagaaactgaagctgaagaagggcaggataaaactgatgaaccagtagaagaa
aatccaaccaagacagaaaccatccctaccgaagaagagtttaaggatcagaccgaacaa
gagaatcaagatctggcagatgcggaatttgataaagaagaaggcgagctcgatctagat
acactggaagatctcgaagagcctacggatgtagctactacacccatgcagtcacctatt
aggatggagacaacaatggaggaagctgaaacaaccattgaaccaccactagaagatgtt
aagaacgacgaaggaggtgatgtagctgttgaagaagcctctgataaacccaacaatggt
aataatcaacaagtagctgaaaccgatctcaagccagagaccacctctgcatctgccact
ccacccacttcctctactccagaaactgaagaaacgaaaagaaaccgatctcaagtagca
gagaccacagtagctacaactgtctctgcatctaccactccagcatctgcaggtgcgagc
gaaaccccagaaactagtgaagaaacgaaaagagcagcgtcgccaagtaggactattaat
atagctgataaagcaaaggagaaagcagctataagacaagccggagtagccgctttagga
ggaacccgaactccctcaccagccaaccgagctccttcaccacccgctcctagaggtcgt
ggtcgcattgtaaacactcgaggaggcggtcgagtgaattctcgtggtggccgaaccaca
cgcggtggacgtggaccacccccgagccagccgtga

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