Brassica rapa (field mustard): 103832455
Help
Entry
103832455 CDS
T03449
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103832455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103832455
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103832455
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103832455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103832455
NCBI-ProteinID:
XP_009106716
UniProt:
A0A397YSZ6
LinkDB
All DBs
Position
A07:complement(28526633..28527964)
Genome browser
AA seq
275 aa
AA seq
DB search
MSLFLKDDSIQIREVWSDNLQEEMDLIREVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY
HYETLKLNVNILNIIQLGLTFSNEQGNLPTCGTDNKYCIWQFNFREFDLDSDIFAVDSID
LLKQSGIDFAKNTREGIESRRFAELLMSSGIVLNGNVHWVTFHSGYDFGYLLKLLTCQNL
PDSQTSFFELINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLT
SCTFRKLKENFFVGPLQKYAGVLYGLGVENGQVAL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttctaaaagacgattcgatccaaatccgcgaagtctggagcgataacctc
caggaggaaatggatctgatccgcgaagtcgtcgacgacttcccttacgtcgccatggac
accgagttccccggaatcgtcgtccgccccgtcggaaccttcaaatccaacgccgattac
cactacgagaccctaaagctcaacgtcaacatcctcaacatcatccagctcggcctcacc
ttctccaacgagcagggcaacctccccacctgcggcaccgacaacaaatactgcatctgg
cagttcaacttccgcgagttcgatctcgactccgacatcttcgccgtcgactccatcgac
ctcctcaagcagtcagggatcgacttcgccaagaacactcgagaagggatcgagtccagg
cgtttcgctgagctcctgatgtcttccgggatcgtgctgaacgggaacgtgcactgggtc
acgttccacagcgggtacgatttcggatacttgctgaagctcctcacgtgccagaacctg
cccgattcgcagacgagcttcttcgagctgatcaatgtttatttcccgacggtgtacgat
ataaagcacctgatgaagttctgcaacagcctgcacggggggctgaacaagctggcggag
ctgctggaggtggagagagttgggatatgtcaccaggcggggtcggatagtttgctcacg
tcttgtactttcagaaagcttaaggagaatttcttcgttggtcccttgcagaaatatgct
ggtgttttgtatggattaggtgttgaaaatggtcaggttgctctctaa
DBGET
integrated database retrieval system
