Brassica rapa (field mustard): 103833084
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Entry
103833084 CDS
T03449
Name
(RefSeq) proteasome subunit alpha type-1-B
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
103833084
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103833084
09182 Protein families: genetic information processing
03051 Proteasome [BR:
brp03051
]
103833084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103833084
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
103833084
Peptidases and inhibitors [BR:
brp01002
]
Threonine peptidases
Family T1: proteasome family
103833084
Proteasome [BR:
brp03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
103833084
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103833084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
103833084
NCBI-ProteinID:
XP_009107431
UniProt:
M4DC55
LinkDB
All DBs
Position
A08:complement(4006149..4008080)
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AA seq
270 aa
AA seq
DB search
MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLASVNKAQSELSSHQ
RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVRLADKAQVCT
QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFN
ESSREDLIKDAILAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQDSIQKVIDTFENVPE
EEEDGGEAEAEAAAAEQGGAGDQDVAPMEM
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaaccagtacgacacagacgtgacaacatggagtcccaccggtcgtcttttc
caagtagagtacgccatggaagccgtcaagcaaggctccgccgcaatcgggctcagatct
cgctcccatgtcgtcctcgcctccgtcaataaagcccagtcggagctctcttctcaccaa
aggaagatcttcaaagtcgatgaccacatcggtgtcgccatcgctggactcaccgccgat
ggccgtgtgctctcgcgttacatgagatctgaatccatcaatcactctttcacctatgag
tctcctctccctgttggccgcctcgtcgttcgtcttgctgataaggcccaggtatgtacc
caacggtcatggaaacgaccttatggtgtgggtttgctggtagggggactggacgagtca
ggagcccacctctactacaactgccccagcggaaactactttgagtaccaagcgttcgcc
atcgggtcacgttcacaagctgcgaaaacttatctagaacgaagattcgagagcttcaat
gagtcatcaagagaagatctgatcaaagatgctattttggccataagggaaactttgcaa
ggggagacactcaagagctcgctctgcaccgtttctgttctaggagtcgatgaaccattc
catttcttggaccaggatagcatacagaaggtgattgatacgtttgagaacgttcccgag
gaagaggaggatggtggtgaggccgaggctgaagctgctgctgcagaacaaggtggtgca
ggtgatcaggatgttgcaccaatggaaatgtga
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