KEGG   Brassica rapa (field mustard): 103833425
Entry
103833425         CDS       T03449                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:brp01009]
    103833425
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103833425
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103833425
Protein phosphatases and associated proteins [BR:brp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103833425
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103833425
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 103833425
NCBI-ProteinID: XP_009107759
UniProt: M4FFJ5
LinkDB
Position
A8
AA seq 793 aa
MEHLSESQINEDVSLKNNPPDKEDTDKDTNMEQPPTSPRHRKVIARWLPNEAQRPIVDDA
PVFSPSLEEFEDTLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEHTKFPTRIQ
TVDLLQNREPMMKKKKPKSRKRKRRRNSRMGSSKRRSGSGSGSSPEAEEKFGFNSGSDFT
LEEFERYALYFKEAYFEKKDSPSVEEIEGEYWRIVEQPTDEVEVYYGADLENRVLGSGFY
KKADSDKGQYAVSGWNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHH
LYSLNYHHFGEPKVWYGVPGSNATSLEKAMRKHLPDLFEEQPDLLHSLVTQFNPSILKDE
GVQVYRVVQNPGEYVLTFPRGYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRK
TSLSHDKLLLGAAYEAVKAVVKENTWKSFCGKNGALTKAIQARLRMEEERLGDLGKDSSS
RLVKMEKDFDSNSERECSSCFYDLHLSASGCKCSPEEYACLRHSDDLCSCEVKDRFVLVR
YTVDELRSLVRALEGEMDDLNIWASKVLLGIEHSDKDQNNTGSVINEEKKLEEGSFDLNI
DLELNYHEDLKEEVSTSGELNASENFDVSVEPINLGFLNYGKLWCNKHAIFPKGFTSRVK
FYNVLDPTRMSNYISEVLDAGLMGPLFRVTLEESPDERFFNVSAQKCWEMVLQRVKDTST
NLGFPTLSRFESINGLQMFGFLSPSIVQAIEALDPNHKLVEYWNHKNQSQSESKDHFISS
NCTKGKLFGVDLM
NT seq 2382 nt   +upstreamnt  +downstreamnt
atggaacatctcagtgaatctcagatcaacgaggatgtgtctttaaagaataatcctcca
gacaaagaagatacggacaaagacactaacatggaacaaccacctactagtccacgtcat
cgaaaggttattgctagatggttacctaatgaagcgcagagaccaatcgttgatgacgct
cctgttttctcaccatcattagaggagtttgaagatacacttgcttacatagaaaagata
cgtccattagcagagccgtatggtatctgtcgaatcatcccaccatccacatggaaacct
ccttgccggctcaaggagaagagcatatgggagcatacaaagtttcccacacggattcag
accgtggacctgcttcagaaccgggagcctatgatgaagaagaagaagcccaagagcagg
aaacgcaaacggagaagaaactccagaatgggttcctctaagagacgatctggctctggt
tctggctcttctcccgaggcagaggagaaattcgggtttaactccggttcagacttcact
ctggaagagtttgagagatacgctctgtattttaaagaggcatacttcgagaagaaggat
tctccgtctgtggaggagatagaaggcgaatactggcggatagtggagcagccaacagat
gaagtggaggtatactatggagctgacttggagaacagggtgcttggaagcggattttac
aagaaagccgatagcgataagggtcagtacgcagtctctggctggaacttgaataactta
ccgcgtctccctggctctgtactctcttttgaggactgtgatatctctggagttctagtc
ccatggctctatgttggaatgtgcttttcttcattttgttggcatgtggaggaccatcat
ctatactcactgaactatcatcactttggggagccaaaagtatggtatggtgttccggga
agcaatgcaacatcactcgagaaggcgatgaggaaacatctgcctgatctgtttgaagaa
cagcctgatctacttcacagcctggttactcaatttaatccttcgatcctgaaagatgaa
ggagtccaagtttaccgggtggttcagaacccaggggagtatgtgctgacgttccctagg
ggttaccatgctggattcaactgcggtttcaactgtgcggaagcggttaatgtagctccg
gttgattggttggctcatggacagaacgctgtggagctttacagtaaagagacgaggaag
acttctctgtctcatgacaaacttctcctcggagcagcttatgaggctgtaaaggctgtg
gtgaaggaaaatacatggaagagtttctgtgggaagaacggtgcccttaccaaggcgatt
caggctcggttacggatggaagaggaaagacttggagatcttggaaaggattcttcttcg
aggttggtgaagatggagaaggactttgattcaaacagtgaaagggaatgctcctcgtgc
ttttatgatttgcatctctccgcttctggctgcaagtgctctcctgaagaatacgcgtgc
cttagacactcggacgatctatgttcatgtgaagtgaaggatagattcgtccttgtccgt
tacaccgtggatgagttacggtcactggtcagagcactggaaggggaaatggacgattta
aatatatgggcttctaaggtgttattaggtattgaacacagtgataaagatcagaataac
actggttcagttatcaacgaggagaagaagctagaggaaggttcgtttgatctgaatatt
gacttagagttgaattatcatgaagacctgaaagaagaggtcagcaccagcggcgagtta
aacgcttcagagaactttgatgtatcggtcgagcctataaaccttggtttcttgaattat
ggaaagctttggtgcaataagcatgctatatttccaaaaggattcacgagtcgtgtcaag
ttctacaacgtgcttgatccaacaaggatgagcaattatatctccgaggttttggatgca
ggactcatgggtccattgttcagggttactctggaagaatctccagacgagcgcttcttc
aatgtctcagcccaaaaatgctgggagatggtgttgcagagagttaaagatacatccaca
aatcttggttttcctactttatcgcggtttgaaagtattaacgggcttcaaatgtttggt
ttcctctcgccgtctatagttcaagccattgaagctcttgatccaaaccataaactggtc
gagtactggaaccacaagaaccaatctcaatccgagtcgaaagatcacttcatatcatca
aactgtaccaaaggaaaacttttcggagtagatttgatgtag

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