Brassica rapa (field mustard): 103833750
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Entry
103833750 CDS
T03449
Name
(RefSeq) xylogalacturonan beta-1,3-xylosyltransferase isoform X1
KO
K18789
xylogalacturonan beta-1,3-xylosyltransferase [EC:
2.4.2.41
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
brp01003
]
103833750
Enzymes [BR:
brp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.41 xylogalacturonan beta-1,3-xylosyltransferase
103833750
Glycosyltransferases [BR:
brp01003
]
Polysaccharide
Structural polysaccharide
103833750
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Orbi_VP4
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
103833750
NCBI-ProteinID:
XP_009108067
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Position
A08:8392750..8396322
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AA seq
527 aa
AA seq
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MAAPRSRRCFLSLLTLFSISLILFSFSLFVYTKPSNKPFIDYKNQFSVSLSFLAPPLSLP
EQNNSTNNTLDSVSSPPPMSLLRQNNTANTTLSPICPPPPPPLRQSNTTNSTLASVPFTS
PVSDQDNQEKSSSPTSKTTFIRKRSGLNKLEADLAKARAAIKRAASTQNYSSSLYKNPAA
FHQSHTEMMNRFKVWTYTEGEAPLFHDGPVNDIYGIEGQFMDEMCVEGPMRSHFRADHPD
DAHVYFVPFSVAKVIHFVYKPITSVEGFSRARLHRLIEDYVDVVATKYPFWNRSRGGDHF
MVSCHDWAPDVIDGNPKLFERFIRGLCNANTSEGFRPNVDVSIPEIYLPKGKLGPSFLGK
SPRVRSILAFFAGRTHGDIRKILFKHWKEKDSQVQVYERLPPGKDYTKLMGMSKFCLCPS
GWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFSIQIPVSRISEIKTILESVSL
VRYLKMYKRVLEVKRHFVLNRPAQPYDVMHMMLHSIWLRRLNLRLIT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcagctccaagatcaagaagatgctttctttctctgttaacccttttttcaatctct
cttattctgttttctttttcactttttgtctacacaaagccctctaacaagcctttcata
gattacaaaaaccaattttctgtctctttatcttttcttgctcctcctctgtctcttccc
gaacaaaacaactcaacaaacaatactcttgattcagtctctagtcctcctcctatgtct
cttctcagacaaaacaacacagcaaacactactctttctccaatctgtcctcctcctcct
cctcctctcagacaaagcaacacaacaaactccacacttgcttcagtcccttttacttct
cctgtctctgatcaagataaccaagagaagtcttcaagtcctacaagtaaaacaactttt
atcaggaagagaagtgggttgaataaactagaagcagatttagcgaaagcaagagcagca
attaagagggcagcctctacgcaaaactatagcagctctctctacaagaacccagccgcc
tttcaccagagtcacacggaaatgatgaatcgttttaaggtgtggacatacaccgaggga
gaggccccactgttccatgacggccctgttaatgacatttacggtatagaaggacaattc
atggacgaaatgtgcgtggagggccctatgaggagccattttcgggcagatcaccctgat
gatgctcacgtttatttcgttccatttagcgtcgccaaggtcatccactttgtctacaag
cccataacctctgtcgaagggttttcgagggctcgcctacaccgccttatagaggattat
gttgatgttgttgctactaagtatcctttctggaacagaagccgtggaggtgaccatttc
atggtatcatgccatgactgggcacccgacgtgatcgatgggaacccaaagttgttcgaa
agattcataaggggactttgcaatgctaacacctcggaaggattcaggccgaacgtagat
gtatccattccggagatctatcttcctaaaggtaaactgggtccatctttcctcggaaaa
tcaccgagagttcgatctatactagcatttttcgcgggaagaacacacggtgacatccga
aaaatcttatttaaacattggaaagaaaaggacagtcaagtacaagtgtatgaacgtctt
cctccgggtaaagattatacaaaactaatggggatgagcaagttttgtctatgcccgagt
ggttgggaggtcgctagcccaagggaggtcgaggctatatacgctggttgtgtgcctgtg
atcatatcggataactattcattaccattcagtgatgtgcttaattgggactccttctcc
atacaaatccctgtttctaggataagtgagatcaaaacgattctagagagtgtctctctt
gttagatacttgaagatgtataagagagtcttagaagtcaagcggcatttcgtgttgaac
cgtcctgctcagccctacgacgtgatgcatatgatgcttcactctatctggttaagaaga
cttaatcttaggcttattacataa
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