Brassica rapa (field mustard): 103834039
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Entry
103834039 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103834039
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103834039
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103834039
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103834039
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103834039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103834039
NCBI-ProteinID:
XP_009108344
UniProt:
M4DWY5
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All DBs
Position
A08:10926557..10931980
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AA seq
642 aa
AA seq
DB search
MLVANSEFSSSILPRSPLIPNPVETIDESIGNNQVSFSTEEVSVPPRNSDEPLSTPLDET
LIAPSPLRLEHGECSDAQVMNKPINHSKRNDTHLDICLSKSPDNRQQWSPNVSPGSDTDV
DSGNQPLWRFRQKPPEIVESPCVGAGLLNLGNSCFINSVLQCFTHTVPLIESLYAYQYED
PCNCNQRFCVIRALRYHIGVALETTSVFSISPVYFFNNLRCFSPDFRRYQQEDAHEFLHA
FLNKLEICCLNRRNDVNFVQHIFGGRLVSELRCCNCNYVSETFEDSLGLSLEIEDVDNLQ
SALDSFTRVEKLEEQMKCDNCDEKVSKEKRLLLQNLPQVITFHLKRFKNNGYFMLKNCNY
VEFPLELDLQPYMSNDQVAAKYYLYALVKHYGSLAYGHYSSFVRSAPSIWHKFNDKQVTR
VDEDCVLSQNSYILFYAREGTPWFSTAIEELHPMTEEDTSSEYPSPKSVSDPSNEECSSE
ISSENVSKKGCGSAGVSDLLHVETEESCGTHSDEPKEDNELSQSEESSDEESSMEVLLDQ
HDPDDDSNNSCTEKEADSCFATERATTGVAFSPYLIGSSPKKPEGNFQIQLERVEAKKNY
EEEEPYKQPLLISLMKKPPPRDRELGEAMSTSGSAQKKLKTS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggctaattccgagttctcttcatctattttacctcgttcgccgttaatacca
aaccccgtcgaaaccatagacgagtcgattggtaataatcaggtctcgttctcgacggag
gaggtctcagttccgcctcgaaactcggatgagcctctctctactccgttggacgaaacc
ctaatcgcgccttctccgttacgtcttgagcacggcgagtgcagtgatgctcaagtcatg
aacaagcctataaatcactctaagagaaacgatacacacttggacatttgtttgtctaaa
tctccagataatcgccaacaatggtctcccaatgtttcacctggatccgatactgatgtt
gactcagggaaccaacccttgtggagattcagacaaaaacctccagagatcgtggaatcc
ccttgtgttggtgctggacttttgaacctaggcaacagctgtttcattaactcagtcttg
caatgtttcactcacaccgtgcctcttatcgagagcctctacgcataccaatatgaagac
ccttgtaactgcaaccagaggttctgtgtgataagggctcttcgatatcacattggtgtt
gcactcgagaccacttcagtattttcaatatctccggtctatttctttaacaatctccgt
tgtttttcacctgacttccggcgttaccaacaagaagacgcacatgagtttctacatgcg
tttctgaataagttggagatatgttgtttgaatcgaagaaatgatgttaactttgttcaa
catatctttggtggtcgtctcgtcagtgagcttcgttgctgcaactgcaactacgtttcc
gagacatttgaagattctcttgggttgagtttggaaattgaagatgttgataaccttcaa
agtgcactagattcctttactcgtgtagaaaaacttgaagagcaaatgaagtgtgataac
tgtgatgaaaaagtttcaaaggagaagcgactcttgctacaaaatttgccacaggttatc
acatttcacttgaagagattcaagaataatggatatttcatgctgaagaactgtaactat
gtcgagtttccgttggagttagacttgcaaccatatatgagcaatgaccaagttgctgca
aaatattatctttatgctcttgtgaagcattatggatcattagcttatggtcattactct
tcctttgtgaggtcagccccaagtatatggcataagtttaatgacaaacaggtcactaga
gtcgatgaagattgtgtgttatcacaaaattcatatattcttttctatgcaagagaaggg
actccatggttttcaacagccattgaagagttacatccaatgaccgaagaagatactagc
tcggaatatccttcgccaaagtccgtctctgatcctagcaacgaggagtgttcatctgaa
atcagttctgagaatgtatccaaaaagggatgtggctcagcgggagtatcagacctatta
catgtcgagacagaagagagttgtggaacccactccgacgagcctaaggaagataatgag
ttgtctcaatctgaagagtctagtgatgaggaatcttccatggaagtgcttttggaccag
catgatcctgatgatgattccaacaactcatgcactgagaaagaagcagattcttgtttt
gccactgaaagagctacaactggtgttgccttttctccttatttgataggctcgtcacca
aaaaagccggaaggaaattttcaaattcaactcgaacgagtggaagctaaaaagaactat
gaagaagaagaaccttacaagcaaccattactaataagcctcatgaagaaacctccacca
cgtgatagagagttgggcgaagctatgtctacatctggttctgcacaaaaaaaactaaaa
acatcatga
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