Brassica rapa (field mustard): 103834087
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Entry
103834087 CDS
T03449
Name
(RefSeq) heat stress transcription factor A-4a isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brp03000
]
103834087
Transcription factors [BR:
brp03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
103834087
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
Suppressor_APC
Nup88
AAA_8
AAA_23
DUF5930
OVT1
Herpes_UL6
DUF3450
Plectin_PPL
COG6_N
PEARLI-4
DUF5339
Tho2
FlxA
ATG16
TMF_TATA_bd
Csm1_N
Motif
Other DBs
NCBI-GeneID:
103834087
NCBI-ProteinID:
XP_009108394
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All DBs
Position
A08:complement(11326981..11328737)
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AA seq
370 aa
AA seq
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MDESNHGGSLPPFLTKTYEMVDDSSSDSIVSWSPQSNKSFIVWNPPEFSRDLLPKFFKHN
NFASFIRQLNTYVTGFRKADPEQWEFANDDFVRGQPHLMKNIHRRKPVHSHSSPSLQPHP
LTDSERQRMNDQIERLTKEKEVLLEELHKQEKEREMFQQQVKELKDQLQHMEKRQKTMAS
FVSQVLEKPELAFNLSPCLQETNERKRRFPRIGLEGSTSPSSQARELQVEQLESSIAVWE
NLVSEDSSESLGQETRSMMTLDVDESSTCPESPPLPCIQLSIDTCPTSPRTIDMNSEPDA
SKEQNTVAPSPPLSAAGGNDVFWQQLLTENPGSTGQKEVQSERKDDKAEKCWWDSRNVNT
LTEQLGHLTS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtaaccatggaggctcgctcccacctttcctcaccaaaacgtacgagatg
gttgacgactcctcgtctgattcaatcgtctcgtggagtcctcaaagcaacaaaagcttc
atcgtttggaacccaccggagttttcaagagaccttcttcccaaattcttcaaacacaat
aacttcgcaagctttatccgacagcttaacacatacgtaactggttttagaaaagctgat
ccagagcaatgggagtttgctaacgatgatttcgtgagaggtcagcctcatcttatgaag
aacattcacagacgcaaacctgttcacagccactcttcaccgagtctccaacctcaccca
ttgactgattcagaacgacagagaatgaatgatcagatcgagagactaaccaaggagaaa
gaagtgttgcttgaagagttacataaacaagagaaggaacgagagatgtttcagcaacaa
gttaaagaacttaaagatcagttacaacacatggagaagcgtcagaagacgatggcttcg
tttgtctctcaggtgttggagaaaccggagcttgctttcaatctctctccgtgtctacag
gagactaacgagaggaaaagaaggttccctaggatcgggttggaaggttccacaagccct
tcttcacaggcaagagagcttcaggtggaacagttagagtcatcaatagcggtttgggag
aatcttgtatctgaagattctagcgagagtttgggacaagaaacaagaagcatgatgaca
cttgatgtggatgagtcatctacttgtcctgaaagccctcctctcccttgcattcagcta
agtatcgacacatgtcctacttctccaaggaccatcgacatgaactctgagcctgatgct
tccaaagaacagaacacagttgctccctctcctcctctttcagcagcaggagggaatgat
gtcttctggcagcagcttttgacagagaaccctggctcaactgggcaaaaggaagttcaa
tcagagaggaaagatgataaagctgagaaatgttggtgggattcgaggaatgtaaataca
cttacagaacagcttggacatctgacttcttga
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