Brassica rapa (field mustard): 103834090
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Entry
103834090 CDS
T03449
Name
(RefSeq) LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103834090
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
Other 90S particles
103834090
Pre-60S particles
Other pre-60S particles
103834090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_Gbeta
WD40_RFWD3
DSE1_N
WDR55
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
EIF3I
PAC11
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_VPS8
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Tub_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103834090
NCBI-ProteinID:
XP_033133269
LinkDB
All DBs
Position
A08:11347978..11351162
Genome browser
AA seq
537 aa
AA seq
DB search
MMGSAATPLTLHKIRRSNFFRLLNPKPQFKPHRSCLSLSLKQASKMITALSWIPKGSLKP
VPDAAEPPSKEEIKELIESGAFTASVDGSDEDEEEMEEEEEEISEVDHAKAVAEAFGKSS
NSKKASTMEVDDVAAGMKELDMDNYDEEDDGIELFSSGRGDLYYPSNELDPYLKDAADDD
DDEEDIDDTTIKPTDSVIICARNEDEVSHLEVYVYEESSDGSPNMYVHHHIIIPEFPLCT
AWMDCPLKGGDKGNFVAVGSKETPTIEIWDLDVRDEVLPCVQLGGVEEMGIIKKKKSKKQ
KYKEGSHTDSVLGLAWNKEFRNILASGSADKKVKVWDVATGTCKITMEHHTKEVQAVAWN
HYAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHCEHAFVVSLEDGTVK
GFDIRAAQSGSDSDLKPSFTIQAHDQDKGVSSISYNLSAPNLLATGSMDKTVKLWDLSNN
EPSCIASHKPKAGAVFSISFSVDNPFLLAIGGSKGELHVWDTLLDANVSRKYGSKQS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagcgccgctacacctctcactctccataaaatccgccgaagcaatttcttc
cgattgttaaaccctaaacctcaattcaaaccccatcgttcttgtctctctctctctctc
aagcaagcaagtaaaatgataacggcactttcatggattccgaaagggtctttaaagcct
gttcctgacgctgctgaacctccttcaaaggaagagatcaaagagctcattgagagtgga
gctttcactgcaagtgtggatggtagtgacgaggatgaagaagaaatggaagaagaagaa
gaagagatcagtgaggttgatcatgccaaggctgtagctgaagcttttggaaagtcttcc
aatagcaagaaggcttctactatggaggttgatgatgtagctgctggaatgaaagaactc
gacatggataattacgatgaagaggatgatggcattgaactcttcagctctgggcgtggg
gatctttattatccgagtaatgagttggatccttatctcaaggatgctgctgatgatgat
gatgatgaagaggatattgatgatacgacaatcaagccaacagattcagtgattatctgc
gctaggaatgaagatgaagtcagccatttagaggtttatgtgtacgaggaatcatctgat
ggctctccaaacatgtatgttcatcatcacattattataccggagtttcccttgtgtact
gcatggatggattgtcctcttaaaggaggtgacaaagggaattttgtagctgttggctca
aaggaaacgccgacaatagagatatgggatcttgatgttagggacgaggtgctaccttgt
gtacaactgggaggagtagaggagatggggattattaagaaaaagaagagtaagaagcag
aaatataaagaaggtagccacactgattcagtacttggtcttgcttggaacaaggagttt
cggaatatacttgctagtggtagtgccgacaaaaaggttaaggtttgggatgtggctact
ggaacatgcaagattacaatggagcatcacacaaaagaggttcaagcggttgcttggaat
cattatgctccagaggtgcttctgagtgggtcgtttgatcagactgttgtattgaaagac
ggaagacaaccttcacactcgggtttcaaatggtcagtcatgtctgacgtcgaaagctta
gcttgggatccccactgtgaacacgcctttgtggtaagtcttgaggatggaaccgtgaaa
ggttttgatatacgtgctgcacagtcaggttcagattctgatttaaagccaagtttcact
atccaagcacatgaccaagacaaaggagtctcctccatctcatacaacctttctgctccc
aatcttttggctacgggttctatggataaaacggtgaaactttgggatctttcgaacaat
gagccttcatgcattgcttcacacaagccaaaagctggagctgtattctccatttcattc
tcagtggacaaccctttcttgcttgctattggtggctcaaagggagaactacatgtttgg
gacacactgttggacgctaatgtctctcgcaagtatggaagcaaacaatcttga
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