KEGG   Brassica rapa (field mustard): 103834110
Entry
103834110         CDS       T03449                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable carotenoid cleavage dioxygenase 4, chloroplastic
  KO
K09840  9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp00906  Carotenoid biosynthesis
brp01100  Metabolic pathways
brp01110  Biosynthesis of secondary metabolites
Module
brp_M00372  Abscisic acid biosynthesis, plants, 9'-cis-neoxanthin/9-cis-violaxanthin => abscisic acid
Brite
KEGG Orthology (KO) [BR:brp00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    103834110
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.13  Acting on single donors with incorporation of molecular oxygen (oxygenases)
   1.13.11  With incorporation of two atoms of oxygen
    1.13.11.51  9-cis-epoxycarotenoid dioxygenase
     103834110
SSDB
Motif
Pfam: RPE65
Other DBs
NCBI-GeneID: 103834110
NCBI-ProteinID: XP_009108417
LinkDB
Position
A08:11471636..11475100
AA seq 593 aa
MYSVSSSSFISTFSPKPSLHLRHSSSSRLLPRINSTVVEERAPIINPSENNGPPHKKLYT
RSNRNAVASPAKLRPETTLVTALFTTVEDVINTFIDPPSRPSVDPKHVLSGNFAPVLDEL
PPTECEIIHGSLPPSLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIRIRNGKATLCSRF
VKTYKYNVEKQNGAPVIPNVFSGFNGVTASVARGALTALRVLAGQYNPVNGIGLANTSLA
FFCNRLFALGESDLPYAVRLTNTGDIETIGRFDFGGKLEMSMTAHPKTDPQTGETFAFRY
SPVPPFLTFFRFDSTGKKQRDVPVYSLTSPSFVHDFAITKRHAIFAEXQIVMRMNIMDLV
LEGGSPVGADNRKTPRLGVIPRYAGDDSEMKWFEVPGFNIIHAINAWDENDGNAVVLIAP
NIMSIEHTLERMDLVHSLVEKVKIDLVTGIVTRHPISARHLDFAVINPAFLGRRSRYVYA
AIGDPMPKISGVVKLDVSKGDRDDCTVARRMYGPGCYGGEPFFVARDPGDQEAEEDDGYV
VTYVHDEVAGESKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDINKL
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgtactctgtttcttcctcttccttcatctctacattctctcctaaaccatctcttcat
cttcgccactcatcttcctctcgtcttcttccccgtatcaactccaccgtcgtcgaagaa
cgagccccgatcattaacccaagcgaaaacaatggccctcctcataagaaactctacact
cggtctaaccgcaacgcagttgcatctccggcgaaactccgaccagaaacgactctcgta
acagctctcttcaccaccgtcgaagacgtaatcaacacgttcatcgatccaccgtcacgt
ccttccgtagatccaaaacacgttctctcaggtaacttcgctcctgttctcgacgagctt
cctccaacggaatgtgagatcatccacggctctcttcctccgtctcttgacggcgcttac
atccgtaacggcccgaacccacagtttctcccccgtggtccttaccacctattcgacggt
gacggcatgcttcacgcgattcgtatccgtaatggtaaagccacgctctgtagcagattc
gtcaagacttataagtacaacgtcgagaaacaaaacggagctcccgtgatccctaacgtg
ttttccggatttaacggcgtgacggcttcggttgctcgtggagctttaacggcgttaagg
gttttagcgggacagtataatccggtcaacggcattggtttggctaatacgagtctagct
ttcttctgtaaccgtctcttcgctttaggagaatctgatttaccctacgccgtaagatta
acgaacactggagatattgaaacgatcggacggttcgatttcggcgggaagttagagatg
agcatgacagctcacccgaaaaccgatcctcaaaccggagaaacgttcgctttccggtac
agtccggttccaccgtttttaacgtttttccggtttgattcaaccgggaagaaacaaaga
gacgttccggtttactccttgacgtctccatcgttcgttcacgacttcgcgatcacgaag
aggcacgcaatcttcgcggagnatcagatcgtgatgaggatgaatataatggatctggtg
ctcgaggggggatctccggttggtgctgacaaccggaaaacgccgcggctcggagtgatt
cctcgttacgccggcgatgattcggagatgaaatggtttgaagttcctggattcaacatc
attcacgctatcaatgcttgggatgaaaacgatggaaacgccgtcgttttgatcgctccg
aatattatgtccatcgagcatacattagagaggatggatctcgttcactccttggtggag
aaggtgaagatcgatctcgtcaccggaatcgtgacacgtcatccgatctccgcgaggcac
ctcgatttcgcggtgatcaatccggcgtttctcgggagacggagccggtacgtgtacgcg
gcgatcggggatccgatgccgaagatctccggagtggtgaagctcgacgtgagtaaaggc
gatcgggatgattgcacggtggcgcgtagaatgtacggtccaggctgttacggcggcgaa
ccgtttttcgtagcgagggatcctggtgatcaggaggcagaggaggatgacggttacgtg
gtgacatatgttcacgatgaggtggctggagagtcgaagtttttggtgatggacgcgaag
tcgccggagcttgaaatcgtcgcggccgtgaggttgccgcgaagggttccgtacggattc
cacggactatttgtaaaggagagcgacattaataagctttaa

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