Brassica rapa (field mustard): 103834115
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Entry
103834115 CDS
T03449
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brp03009
]
103834115
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
103834115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
Fer4_10
Fer4_6
AAA
AAA_23
AAA_29
RsgA_GTPase
Rad17
NACHT
Fer4_2
nSTAND3
DUF5906
Fer4_9
TsaE
SRP54
NPHP3_N
Thymidylate_kin
AAA_5
AAA_33
ORC-CDC6-like
Fer4_4
Fer4_21
AAA_24
Fer4_16
Fer4_7
TniB
AAA_7
AAA_19
Fer4_8
Mg_chelatase
Fer4_17
G-alpha
AAA_13
Motif
Other DBs
NCBI-GeneID:
103834115
NCBI-ProteinID:
XP_018509337
UniProt:
A0A3P6BFS9
M4DWS0
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All DBs
Position
A08:11490452..11494388
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AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKLAFISEELCIGCGI
CVKKCPFEAIQIINLPRDLEKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGRFTNPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
RGNVGEVLDQKDERDKKAELCADLELNQVIDRAVENLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIQSYARYKYPTMTKTQG
NFRLKVTEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDETEESDIEIPEFNVSYKPQ
KISPKFQNSVRHLLHQKIRDSYMHPQFVSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIV
YEGQPSIDCIANCPQSLLSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgattgacacgtattgcaattgtgagttcggaccgttgcaagcctaagaaa
tgtcgccaagagtgcaagaagagctgtcctgtcgtcaagacaggaaaactttgtattgag
gtgactgttggttccaagcttgcttttatctctgaggagttgtgcatcggttgcggtatt
tgtgtcaagaaatgcccatttgaagctattcagattatcaatcttcccagagacttggag
aaagatacgacccatcgctatggggccaacactttcaagttgcacaggctgccagttcca
aggccagggcaagtcctagggttggttggcaccaatggtattggaaaatcaaccgctctg
aaaattttggcagggaagctcaaaccaaacttaggccgtttcactaatcctccagactgg
caagaaatcttgactcacttccgtgggtcagaacttcaaaactacttcacccgtattcta
gaagataatctgaaggccattataaagcctcagtatgtggaccacatcccaaaggctgtt
cgaggcaatgttggagaggtccttgaccagaaggacgagagagacaagaaggcagagctc
tgtgctgatctggagctgaaccaggtcattgatcgtgctgttgagaatttgtctggtggt
gagctgcagaggtttgccatcgctgttgttgccatacaaaacgccgagatttacatgttt
gatgagccgtctagttaccttgatgttaagcaaagacttaaagctgctcaagttgttcgt
tctctcctgaggcctaacagctacgtcattgtggtggagcatgatctcagtgttctggac
tacttgtcggatttcatttgctgtctgtatgggaaaccaggagcctatggtgtcgtgact
ctccctttctctgtcagagaagggatcaacattttcttggctgggtttgtccccactgaa
aatttacgttttagagatgaatcgctgaccttcaaggttgctgagactccacaagaaagt
gctgaagaaatacagtcgtacgctaggtacaaataccctacgatgaccaaaactcaagga
aactttaggttgaaagtgacggaaggtgaattcaccgactctcagattattgtaatgctt
ggggagaatggtacagggaagacaacctttatccgaatgctggcgggtttgttgaaacct
gacgaaacagaagaatcagacatagagataccagagttcaatgtttcttacaagcctcag
aagatcagccccaagtttcagaattcagttagacacttgctacaccaaaagattcgagat
tcttacatgcatcctcaattcgtgtcggacgtgatgaaaccacttcagattgagcagttg
atggatcaagaagttgtcaatctctctggaggagagttgcaaagggttgcattagctctg
tgcctcggaaagcctgcggatatctacctgatcgatgagccgagtgcgtatctggattca
gagcaacgtattgtggcttctaaagtcattaagcggttcattctccacgcaaagaaaact
gcatttatagtcgagcatgactttataatggcaacatatctcgcagatcgagtcattgtc
tatgaaggacaaccatccattgactgtattgcaaactgtcctcaatcactgctcagtgga
atgaatttgtttctatctcatctgaacatcacattcagaagagatcccaccaatttcaga
ccaaggatcaacaaattagagtcgactaaagacagggagcaaaagtctgctggctcgtac
tattacttggatgattaa
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