Brassica rapa (field mustard): 103834131
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Entry
103834131 CDS
T03449
Name
(RefSeq) class V chitinase
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00520
Amino sugar and nucleotide sugar metabolism
brp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
103834131
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
103834131
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Motif
Pfam:
Glyco_hydro_18
Phage_stabilise
YhfT
Motif
Other DBs
NCBI-GeneID:
103834131
NCBI-ProteinID:
XP_009108437
UniProt:
A0A397YAD9
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Position
A08:complement(11616103..11623207)
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AA seq
380 aa
AA seq
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MSSTKPTSLIVSITFFFFFCLLVQPSSAQTVVKGSYWFPESEFPVTDINSSHFTHLFCAF
ADLNSQNNQVTISSTNQPKFSTFTQTVQRRNPSVKTLMSIGGGIANKSAFASMASNPTSR
KSFIDSSIRLARSNGFHGLDLDWEYPSSATEMNNFGTLLREWRSAVAAEASSTSRPRLLL
AAAVFYSSDYYSVLYPVQAVASSLDWVNLMAYDFYGPGWSTVTGPPAALNSPSNAGPSGD
AGVRAWIQAGLPATQLVLGFPYYGYAWRLSNANSPSYYAATTGSAISPDGSIGYGQIRKF
IVDNGATTVYNSTVVGDYCYAGTTWIGYDDNQSIVTKVRYAKQKGLRGYFSWHVGADDNS
GLSRSASRAWDATTVIRRKF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacaaaacccacatcactcatcgtctccatcaccttcttcttcttcttctgt
cttctcgtccaaccctcatcggcccaaaccgtcgttaaagggtcgtactggtttccagag
agtgaattcccagttaccgacattaactcatctcacttcactcacctcttctgtgctttc
gctgatctcaactctcaaaacaatcaagtcactatctcctccaccaaccaaccaaaattt
tcaacctttacacaaaccgtgcaaaggagaaacccttcagtgaaaacccttatgtctatc
ggcggtggaatcgctaataaatccgcgtttgcttccatggcaagtaacccaacatctcga
aaatcattcatcgattcgtctattagacttgctaggtccaatggatttcatggtcttgat
ctggactgggagtatccgagtagtgcaacggagatgaacaacttcgggacgctacttcga
gaatggcgatctgcggttgcagcagaagcaagtagcactagtagaccgcgtttgcttttg
gcggctgcggttttctactcttctgattactattctgtactgtacccggttcaagctgtt
gccagtagcttagattgggttaatcttatggcctatgatttttatggaccaggttggtcc
accgtaaccggtccacccgccgccctcaatagtccttcaaacgcaggtccgagtggcgac
gctggagtgagggcatggattcaagccggacttccagcaacgcaattagtcttgggattt
ccttactacggctacgcatggcgtctctcaaacgccaacagtcctagctattacgcagcc
accactggatcggcaatttcaccggacggttcgataggatacggtcagataagaaagttt
atagtggataacggagcgacaacggtttataattccacagtggtcggagattactgttat
gctgggacgacttggatagggtatgatgataatcagagtatcgtgacgaaagtgagatac
gctaagcagaaaggtctgcgtggttacttctcgtggcatgttggagctgacgataactct
ggtctatctcgttcagcgtcacgggcatgggatgctaccacggttatccgaaggaagttt
taa
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