Brassica rapa (field mustard): 103834158
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Entry
103834158 CDS
T03449
Name
(RefSeq) elongation factor Tu, chloroplastic-like
KO
K02358
elongation factor Tu
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103834158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
brp03012
]
103834158
03029 Mitochondrial biogenesis [BR:
brp03029
]
103834158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103834158
Translation factors [BR:
brp03012
]
Eukaryotic type
Elongation factors
103834158
Prokaryotic type
103834158
Mitochondrial biogenesis [BR:
brp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
103834158
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103834158
Exosomal proteins of breast cancer cells
103834158
Exosomal proteins of colorectal cancer cells
103834158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
GTP-eEF1A_C
MMR_HSR1
cobW
CbiA
Motif
Other DBs
NCBI-GeneID:
103834158
NCBI-ProteinID:
XP_033134037
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Position
A08:11767973..11769662
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AA seq
472 aa
AA seq
DB search
MAISSPAACSSRLITSYSTPSLPLSPAAISTSTKLKTLNLSSFLPPHSLTTLPQSTRRSF
TVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSVAKKYDEIDAAPEER
ARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTK
EHILLAKQVGVPDMVVFLNKEDQVDDSELLELVELEVRELLSSYEFNGDDIPIISGSALL
AVETLTENPNVKRGDNKWVDKIYELMDAVDSYIPIPQRQTELPFLLAVEDVFSITGRGTV
ATGRVERGTVKVGETVDLVGLRETRNYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADI
QRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMN
DKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatcatctcccgccgcttgttcctctaggctcatcacttcctactccacccct
tccctccctctctcccccgccgccatttccacctccaccaaactcaaaaccctaaacctc
tcctccttcctccctccacactcattaaccacccttccccagtccacacgccgctccttc
accgtacgcgcggcacgtggcaaattcgagcgaaaaaagcctcacgtcaacatcggaaca
atcggacacgtggaccacgggaaaaccaccctaaccgccgccctcaccatggccctcgcc
tccatgggaaacagcgtcgccaaaaagtacgacgagatcgacgccgctcccgaggagaga
gcccgcggaatcacgatcaacaccgccaccgtcgagtacgagaccgagaaccgccactac
gcccacgtggactgccccggacacgccgattacgtcaagaacatgatcaccggagccgcg
cagatggacggagccatcctcgtcgtctccggcgccgacggaccgatgccgcagaccaaa
gagcacatccttctcgctaagcaggtcggcgtcccggacatggtcgtcttcctcaacaaa
gaggatcaggtcgacgactcggagctgcttgagcttgtggagcttgaggtgcgtgagctt
ttatcctcttacgagttcaacggcgacgatatcccgattatctccggatccgcgttgtta
gctgtggagacgctcacggagaatcctaacgtgaagcgtggtgataacaagtgggtggat
aagatctacgagctcatggacgccgttgatagctacatccctatccctcagagacagact
gagttgcctttcttgttagctgttgaagatgtgttttccatcaccggacgtgggactgta
gccacggggagggttgagagagggacggttaaggttggagagactgttgatttagttggt
ttgagagagactaggaactataccgttactggtgttgagatgtttcagaagattctggat
gaggccttagctggtgacaatgtggggttgttgcttaggggtattcagaaggctgatatt
cagagggggatggtgttggctaagcctgggagtattactccgcatactaagtttgaggcg
attgtgtatgtgttgaagaaggaagaaggtgggaggcattctccgtttttcgctgggtat
aggcctcagttttacatgaggacgactgatgtcacggggaaagtgaccaagattatgaat
gataaagatgaagagtcgaagatggttatgcctggggatagggtgaagattgttgtggag
cttattgtgcctgtggcttgtgagcaagggatgaggtttgctattagagaaggagggaag
actgttggtgctggtgttattcagtctatcatcgaatga
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