KEGG   Brassica rapa (field mustard): 103834415
Entry
103834415         CDS       T03449                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103834415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brp03021]
    103834415
   03036 Chromosome and associated proteins [BR:brp03036]
    103834415
Transcription machinery [BR:brp03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103834415
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103834415
   PBAF complex
    103834415
   GBAF(ncBAF) complex
    103834415
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6 MEF2_binding PIF6
Other DBs
NCBI-GeneID: 103834415
NCBI-ProteinID: XP_009108732
LinkDB
Position
A08:complement(13068305..13072714)
AA seq 964 aa
MDEKRTLALAGDSPASEPSMRRRLKRKANALGTSNSASAKRMLKREKAMLASFSPVHSGP
LTRARQAPSSMPSAAGVKAEVVVGVVGTDGEKLKEEEEERDKAAIREWEAKIEAEFEAVR
SRESNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTPEVYREIRDWIMKKFHSDP
NTQIEVKDLSELEVGDSEAKQEVMEFLDYWGLINFHPFPSSPDASSTPGDHDDLGDKESL
LNSLYRFQTDEASPALVHKPRPTAQATPSGLFPDPVAPDDLLKQEGPAVEYHCNSCSADC
SRKRYHCPTQADFDLCTECFDSGKFSSDMSSSDFILMDSAEAPGVGSGKWTDQETLLLLE
GLEIFKENFNEIAEHVATKTKAQCMLHFLQMPIEDAFLNQFDYKVPSTKDTTDSAVSKDD
KSVQKEAPEETENKNPVKEAETVKKTPETEDDNEGNVPPESSKPGDASEETSEVEAEQKT
LKVETDTDERCKDDADENVALKALTEAFEELGYPITPEASLSFADLGNPVMGLAAFLVRL
AGSDVATASARASINSLKSNSGLLLATRHCFVLEDPLDNKKDSAESKSVDAVGNGDSAHK
DEQPEEKSQKAEGVSLNANDREMTEADSGKENQDSVSEEKQPGSRTKKSARKPDAKGLKK
STNSVATEKSEEPADIICTSQDKCSGKELQEPLKDGNKLSSENKDASQATVSQLAPDASQ
PEASKDVEMKDMSQSQKDPQDMVKTVGEEIEQAKKNAKDVLSMPDTSVAQQAIASPSVPE
NGPDGENTKKEKDVSEETKDKHNTDKLKRAAISALSAAAVKAKHLAKQEEDHIRQLSGSL
IEKQLRKLEAKLSIFNDAESLTVRVKEQLERSRQRLYHERAQIIATRLGAPPSMSSKASL
PTNRTAANLANVAQRPPMGMSFPRPPMPRPPGASPFSVPGSHVAATAMSGSSGPPQGSDN
VSSV
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggatgagaaacgaaccctagctttggctggagactctccggcatctgagccgtcgatg
cggcggcgtttgaaacgcaaagcgaacgctctggggacctccaattccgcttctgcgaag
aggatgttgaagcgcgagaaggcgatgcttgcttccttttctccggttcacagcgggcct
ttgactcgagctcgacaggcgcccagcagcatgccgtccgcggctggggtgaaggcggag
gtggtggtgggggtggtgggtacggacggggagaagttgaaggaggaggaggaagagagg
gataaagcggcgatccgtgagtgggaggctaagatcgaagctgagttcgaagcagttaga
tctcgcgagagtaatgtacacgtggtgcctaatcattgcggttggttttcatgggaaaaa
attcacccgcttgaagagcgctcattgccctctttctttaacggcaagttggagggtcgt
actcctgaggtgtatagggaaatacgggattggatcatgaagaagtttcattcagatccg
aacacacagatagaagttaaagacttatcagaactcgaggttggagactcggaagcaaag
caagaggtgatggagttcttggactactggggcttaatcaattttcacccattcccatca
tcaccagatgctagttctactcccggcgatcatgatgatttaggggataaggagtctctg
cttaacagtttatatcggtttcaaacagatgaggcttcccctgctcttgttcacaagcct
cgtcccacagcacaagctacgccatcagggttgttcccagatccggtggcgcctgatgac
ttgctgaagcaagagggtccagcggtcgaatatcactgcaactcctgttcagctgattgc
tctcgcaagcgctaccactgccctacgcaggcggattttgacttgtgtacggaatgcttt
gacagtggcaagttcagctcagatatgtcatcttccgactttatactaatggattctgcg
gaggctcctggcgttggtagtgggaagtggactgatcaagagactcttcttctccttgaa
ggcttagaaattttcaaggaaaattttaatgagattgcagagcatgttgctacaaagaca
aaagctcagtgtatgcttcattttcttcaaatgccaatcgaggatgcgtttcttaatcaa
tttgactacaaagttccaagtacaaaagacactacagattcagctgtgtctaaagatgat
aaatctgtccaaaaagaggctcctgaagagacagagaataagaatcctgttaaagaagct
gaaactgtgaaaaaaactccagaaacagaagatgacaatgaaggaaacgttcctccagaa
tcttcgaaacctggagatgcgagtgaagaaactagtgaagtggaagccgagcagaaaacg
ctgaaggtagaaaccgacactgatgaaagatgtaaagatgatgctgatgaaaacgttgct
ttgaaagctctgactgaagcttttgaagagcttggttatcctatcacacctgaagcttct
ttatcctttgctgatttaggaaatcctgtcatgggactggcagcttttctggtgaggttg
gcgggatctgacgttgctactgcttcagcccgggcttccataaactctctgaaaagcaat
tctggattgctgcttgccacaagacattgttttgttctcgaagatccactagacaacaag
aaggattcagctgaatcaaaaagtgtggatgcagtggggaacggtgatagtgcccataaa
gatgaacagccagaagaaaaaagccagaaagcagaaggtgtctccttgaatgcaaatgac
agggaaatgacagaagctgattcaggcaaagaaaatcaggattcagtctctgaagaaaag
caacctggttccagaactaaaaaatctgctaggaaaccagatgctaaaggactaaaaaaa
tctactaattcagtggcaactgaaaaatcagaggaaccagcggatataatttgtacatcg
caggataaatgttcagggaaagagctccaagaacctttgaaggatgggaataagctttct
agtgaaaataaagacgcctctcaagcaactgtctcccagttagctccagatgcttctcag
ccagaggcatcaaaagatgtggagatgaaggatatgtcacagtcacagaaggatcctcaa
gatatggtcaaaacagtaggagaggagattgaacaggctaagaagaatgcaaaggatgtt
cttagtatgccagacacgtctgttgcacagcaggccattgcatcaccttctgtaccggaa
aatggaccagatggtgaaaatacaaagaaagagaaggatgtctctgaagagacaaaagac
aaacataacactgataagcttaagcgcgcagctatctctgctctctcagctgcagcagta
aaggcaaagcatcttgcaaagcaagaagaagatcatatccgacaactttctggatcattg
atagagaagcagttacgtaaactagaagcaaaactatcaatattcaacgacgctgaaagc
ttgacagtgagggtaaaagagcaattggagaggtcaaggcaaaggctataccacgaaaga
gcgcagatcatagcaactagactcggtgccccaccttcaatgtcctcaaaggcatcatta
ccaacaaacagaaccgctgcaaatcttgctaatgtggctcaaagacctcccatgggtatg
tcatttccacggccaccaatgccaaggcctccaggtgcatcaccattctctgttcctggc
tcacatgtagctgcaacagcaatgagcggaagctcaggtccacctcaaggttcagacaat
gtttcttcggtttag

DBGET integrated database retrieval system