Brassica rapa (field mustard): 103834581
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Entry
103834581 CDS
T03449
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00040
Pentose and glucuronate interconversions
brp01100
Metabolic pathways
Module
brp_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103834581
Enzymes [BR:
brp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103834581
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GFIT
Motif
Pfam:
Glyco_hydro_28
RVT_3
Motif
Other DBs
NCBI-GeneID:
103834581
NCBI-ProteinID:
XP_033133966
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Position
A08:complement(13857995..13864701)
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AA seq
555 aa
AA seq
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MHAFFLCSFVQEVWQKAPLTKTVYIDATDDFQAVLVKFRHVTCLPPSGISSPVLPWICWS
LWTARNRLIFEDKKLNPNEVMLRSLVSAREWIQAQENLPQKHKCYLKGPSFTGTMHGSKQ
TTTCNSDASWNSTTRKAGLAWIISTLTSNQLHEGSLRTEKPAADLDIISLKVCSDCQTLI
RAIQNRPQIKEIFGIVFDIMQIFSAFASISFCFVPRSENRKTDLLGKQALVSSASIDGKL
EAPKTIEEWGDIGEGRCWLCFKNVKGIVLNGSGVLHPHGEAWWSSVDHSNRPRAVGFNAS
ADIIYSGLTQFNSPKNHVSVYNCTNATLSNLHLIAPKDSPNSDGIDIALSNNVQIFNSSI
QTGDDCVAINGGSHDINITHVTCGPGHGISIGSLGRDGLTETVENVQVRHCSFNGTMYGA
RIKTWAGGKGFAKNIIYENITLIDAAYPIIIDQHYCNGGSELNATAVKVSDVTFRNFRGT
CADDIAIKLACDKLVNCQNIVMENINIVSSSSKEHLSTYCQYANVVTHFVNVDIKCGSTS
SSDFDPVFSTSGALC
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccttcttcctctgttcgttcgtgcaggaagtgtggcaaaaagctcccctcaca
aagacagtttacatagatgcgactgatgatttccaagctgtcttggtaaagttccgacat
gtaacttgtcttccaccgtcaggtatctcatcccccgtccttccttggatctgctggtcg
ctttggacggcgagaaacagactgattttcgaagacaagaagctcaaccctaacgaagtc
atgcttagaagtttagtctcagctcgtgaatggatccaagctcaagaaaatttaccacag
aagcacaagtgttacctcaagggccccagtttcaccggaacgatgcatggtagcaagcaa
actacgacatgcaactccgacgcgtcttggaactcaactactaggaaagcaggcctagcg
tggatcatctcaacactgacatcaaatcaactccacgaaggatcgctacgcactgaaaaa
ccagctgcagatctcgacatcattagcctcaaggtctgctccgactgtcaaacgctcatt
agagcaatccaaaacaggccccagattaaggaaatcttcggtatcgttttcgatatcatg
cagatcttctctgcattcgcatctatctctttctgttttgttccacgatctgagaaccgt
aaaactgatctgttaggtaaacaagccttagtttcatctgcttctattgatgggaaactt
gaggcgccaaaaacgattgaagagtggggagacataggagaaggtaggtgctggctatgt
ttcaaaaacgtgaaaggtatcgtcctcaatgggtctggtgtcctccaccctcatggcgaa
gcttggtggtcgtctgttgatcactccaatcgaccacgggcagttggatttaatgcaagt
gctgacataatatatagtggactaactcaattcaatagcccaaagaatcatgtttcagtt
tataattgcaccaacgcaactttatcaaatcttcatctcatcgcacctaaagatagtcca
aacagtgatggtatcgacattgctctttcaaacaatgtccagattttcaattcatctatc
caaacaggtgacgattgtgttgcgattaatggtggttcacacgatatcaacataactcat
gtgacatgtggtccgggccatggcatcagtattggaagtttgggcagagatgggctaact
gaaacggttgagaacgtgcaagtaagacactgcagcttcaatggtactatgtatggggca
agaatcaaaacttgggctggaggcaaagggttcgccaaaaatattatatacgagaacatt
acattaatagatgccgcatatcctatcatcatcgatcagcattattgtaatggtgggtca
gaactgaatgctactgctgtgaaagtgagcgatgtgacatttagaaatttcagagggaca
tgcgcagatgatattgcgataaaactagcttgtgacaagctagtaaattgtcaaaacatc
gtgatggaaaatataaacatcgtttcttcatcttcaaaagagcatctctccacgtattgt
caatacgctaatgtagttactcactttgtcaacgttgatatcaagtgtggttcaacctca
agctccgacttcgaccccgtattctcaacctccggcgccctgtgctga
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