Brassica rapa (field mustard): 103834591
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Entry
103834591 CDS
T03449
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103834591
03009 Ribosome biogenesis [BR:
brp03009
]
103834591
Spliceosome [BR:
brp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103834591
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
90S particles
RNase
103834591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-GeneID:
103834591
NCBI-ProteinID:
XP_009108903
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Position
A08:14018583..14021708
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AA seq
418 aa
AA seq
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MKIAIEGCMHGDLDSVYKTIQHHEHIHSTKVDLLLCCGDFQAVRNEKDMDSLSVPIKYRE
MKSFWKYYSGQEVAPVPTIFIGGNHEASNYLWELYYGGWAASNIYFLGYAGVVKFGNLRI
GGLSGIFNGRDYHSGHFERPPYNRNTIRSVYHVREYDVHKLMQLEEPLDIFLSHDWPVGI
TDYGDSKALIQQKPYFQEEIQARTLGSKPAALLLEKLKPRYWFSAHLHCKFAASVQHGSD
GSVTKFLALDKCGPGKKFLQIIDIESEPGPFEVLYDEEWLAVTRMFNSVFPLTERRANFS
SASMNIQESRECVRKKLEERQFKPFEFVRTVPAHNPSQRIFDSMPDIPQNPQTLSLLELL
GLPYLLDSSPVTGERTAIPASPAPPSDFQTYDSEEIPIDDTDDLEEIAEAKADDPTRE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgctattgaagggtgtatgcatggagaccttgacagtgtgtacaaaacaatt
caacaccatgaacacattcacagcactaaagtcgatctcctcctctgctgcggcgatttc
caggctgttagaaatgagaaagacatggatagccttagcgtacctataaaatacagagag
atgaagtccttctggaagtactactccggccaagaagttgccccggttcccaccattttc
atcggcgggaatcacgaggcttcgaactacttgtgggagttgtactatggtggttgggct
gcctccaacatctactttctaggttatgccggggttgtgaagttcggtaatctgcgtatt
ggaggtctttctggtattttcaatggccgagattaccattcaggacactttgagcggccg
ccatacaacaggaacactattagatcagtctatcatgttcgtgagtatgatgtccacaag
ttgatgcagcttgaagagccgcttgatatattcctctcacacgactggcctgttggaatc
actgattatggagactcaaaagcacttattcagcaaaagccttacttccaagaagagata
caggcaagaactcttggaagtaaaccagcggctcttctgctagaaaaactgaagccacgg
tattggttttcagctcacctacactgcaaattcgctgcttctgttcaacacgggagcgat
ggctcagtgacaaagtttcttgccttagataaatgcggcccagggaaaaagtttctacag
atcattgatatcgagtcagagcctggaccttttgaagtcctatacgacgaagagtggcta
gcagtaacacgaatgttcaattctgttttcccactaacagagagacgtgcaaatttcagc
tctgcgtcaatgaatatacaagagagccgcgagtgtgtgagaaaaaagctagaggaaagg
caatttaaaccttttgagtttgtaaggacagtccctgcacataacccttcacagcgtatc
tttgattccatgcctgatatcccgcagaatcctcagactctgtctttgttagagctcctt
ggtcttccatatctccttgattcttcaccagtaacaggggaaagaaccgcgatccctgct
tcaccggctcctccatcagactttcaaacgtatgatagtgaagaaatcccaatcgatgat
actgatgatttggaagagatagcagaagcaaaagccgacgaccctacaagagaatag
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