Brassica rapa (field mustard): 103834763
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Entry
103834763 CDS
T03449
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103834763
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103834763
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103834763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4
zf-ANAPC11
zf-RING_16
zf_RING_Vps8_fungal
zf-RING_UBOX
DUF2921
zf_RING_Vps8
Prok-RING_4
zf-RING_Vps41
PHD_NSD
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103834763
NCBI-ProteinID:
XP_009109096
UniProt:
M4D1M0
LinkDB
All DBs
Position
A08:complement(14933342..14937462)
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AA seq
565 aa
AA seq
DB search
MKKRQHLGVLGLGFVEFQIIFLLSIWLAFPQQATGLRPIREKARTWSDEWLFGRKQVPEG
GRFSAWNITGTYRGNWKFLDSLNSSSKFQDFQKSNGNSVVELVAVPTKITGVHYVQGVVL
FHDVFDNEQNLGGAQISLEGVYIWPFRQLRLVANSGKESDAGQDENNLLSNPYHLLGIFS
SQVFQESTRDRILQRKISPRNEMDKHCNIEIAAQISRVASSDNNGDKSYYHMEGLMESPG
VGDDGDCFSPLFLNATSVNVEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHGNTQSGAAK
VSIVMIGHQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKAT
RPSISGEGWETMRRELSFLYSRFYGILLGGILIMYELHNYMRPILLLMYSFWIPQIVTNV
IRDSRKPLHPYYIVGMTATRLAIPLYVFGCPHNFMRIVPSKAWCVFLCTFMGLQAVILLL
QHYFGSRCFVPRQMLPEKYNYHRRFNQDVSRNTDCVICMTAINLRQRTSDFMVTPCEHFF
HTGCLQRWMDIKMECPTCRRSLPPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcgtcaacatttgggggttttgggattagggttcgtcgaatttcagatcatc
ttcttgttatcgatttggttggcgtttccgcagcaagctacggggcttagacccattagg
gagaaagctcgaacatggagcgacgagtggctctttggtaggaaacaagtacctgaagga
ggacggttctccgcatggaacataacaggaacatatagagggaattggaagtttctggat
tcattaaatagctcttcgaagtttcaagacttccagaaatcaaatggtaattctgtggtt
gagttagtggctgttccaacaaagataaccggtgtgcactatgttcagggtgtggtttta
ttccatgacgtatttgacaatgaacaaaatttgggtggtgcccaaataagtctggaaggt
gtatatatatggccctttagacaacttcgccttgtggccaacagtggcaaggagagtgat
gcagggcaagatgagaataatcttctctcaaatccctatcatctgcttggaatcttttcc
tcgcaagtgtttcaagaatctacaagagacagaatactgcaacggaagatttcgccaaga
aatgagatggataagcactgtaacatcgaaatagcagcgcagatatcccgtgtggcttct
agtgacaacaatggagacaaaagttattatcacatggaaggattgatggaaagtcctggg
gtaggcgatgacggagattgtttctcgcctttgttcctgaatgcaacttctgtgaatgtc
gaggtctactacaacaaagctgtgaactatacactgatggtcacttttgtctctttcctc
caggttcttttgttgatccggcaaatggagcacggtaacacacaatctggtgctgccaag
gtatccattgtaatgatcggacatcaagcaatcatggatgcttacttatgccttttacat
ctcactgctgggatattagttgaatctctatttaatgcatttgcaaccgccgcgttcttc
aaattcgtagtcttttcgattttcgagatgagatatcttctggctatatggaaagcaacc
aggccttcaatcagcggagaaggctgggagacaatgaggcgtgaactctcctttctctac
agccgtttctatgggattctacttggagggatattgataatgtacgagctccacaactac
atgcggccgattcttcttctcatgtactcattttggataccacagatagtcaccaacgtc
atccgggattcaagaaagcccctgcacccgtattacatcgtgggcatgactgccacacgg
ttagctataccgttgtatgtttttggatgcccacacaacttcatgcgtatagtgcctagc
aaggcctggtgcgtgttcttgtgcacgttcatggggttgcaagctgtcattcttcttctt
cagcattactttggttcacgttgctttgttccccgtcagatgctaccagagaaatacaac
taccacaggagatttaatcaggacgtaagccgcaacactgattgtgtcatctgcatgact
gctatcaatctcagacagcgtaccagtgatttcatggtaactccatgtgaacatttcttc
cacacgggatgcttacagagatggatggatataaagatggagtgcccgacttgtcggcgt
tcccttcctccagcttaa
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