Brassica rapa (field mustard): 103834881
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Entry
103834881 CDS
T03449
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103834881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103834881
Enzymes [BR:
brp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103834881
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103834881
Multi subunit type E3
ERAD complex
103834881
LMBR1L-GP78-UBAC2 complex
103834881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
zf-ANAPC11
zf-RING_11
Endonuclease_7
zf-C3HC4_4
zf-RING_16
zf-RING_5
zf-RING_Vps41
FAR1_N
U-box_ZFPL1
zf_RING_Vps8_fungal
E3_UbLigase_EDD
zf-HC5HC2H
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
103834881
NCBI-ProteinID:
XP_009109222
LinkDB
All DBs
Position
A8
Genome browser
AA seq
591 aa
AA seq
DB search
MGIRYLSVSVASTALSFVGLQVWTELSLDRLRADGLIAKNISLGDSEHALELLLGSYFTI
ALLTNFVLNVYILLILSLKTLFFGDLYGVETKKLVERLANYIIYKIKSPFNILFSKGTFL
PLVIPPTIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVL
SVDMLWIKLSLMTYNTIGSSVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLVVNNS
DCQRSKFLDSVTAGSLLEWKGLLNRNLGFFLDMATLVMALCHYLHIWWLHGIAFHLVDAV
LFLNIRALLSAILKRMKGYIKLRIALGSLHAALPDATSEELRAYDDECAICREPMAKAKR
LHCNHLFHLGCLRSWLDQGLNDVYSCPTCRKPLFAGRTESEANPRTVEVSRDEQLARQLE
RQNSPAHPLATGLFPAEMPSSVETDPSRNLGLDPSWLQTWSDQGIDVAGPSTTASRSVGL
GRVQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSTTTTIPPGAGGRTGGLHLRT
VSNVTNESLASILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggggataaggtacttgtcggtctcggtggcatcaacagctctgagctttgtggggctt
caagtctggacagagttgtctttggataggcttagagctgatgggctgattgcaaagaac
atttctttaggagactccgagcatgcgcttgagctgcttctgggatcttactttacaatc
gccctgttgaccaattttgtgctcaatgtgtatattcttcttatactctccctcaagact
ctattttttggagatttatatggcgttgaaactaaaaagttggtggagcgacttgccaat
tacatcatttacaagattaaatccccatttaacatccttttctccaagggtacatttctg
ccgctggtgattcccccaacaatatttcagggtgtactgtggacagtttggctgactgtt
ctatgcactttaaagatgtttcaagctttggctagagaccggcttgaacgattgaatgca
tctccttcctctacaccttggacatactttcgtgtgtattcagttctcttcttggttctc
tctgttgatatgttgtggataaagctttcccttatgacatacaatacaattggttcttct
gtgtatctgttgttactttttgagccatgcagtattgcttttgagaccttgcaggcgctg
ttaattcatgggtttcagttacttgatatgtggatcaatcacttagtagtcaataactcg
gactgccaaagatccaagtttcttgattccgtgacagcaggctcactgttggaatggaag
ggcctcctcaaccgaaaccttggtttcttcctggacatggctactttggtaatggcacta
tgtcattatttgcatatctggtggctccatggcattgcctttcatctggtggatgcagtt
ttgtttctcaacatacgtgcattgctcagtgcaattttgaaacgaatgaaaggatacatt
aaactgagaatagctctgggttctctccatgcagcgcttcctgatgcaacttctgaagag
ttacgtgcatatgatgatgaatgtgctatatgccgggaacctatggctaaggctaaaagg
cttcactgcaaccaccttttccatcttggatgcctgcgatcctggttggatcaaggtcta
aatgatgtttattcttgtcctacatgtcgtaagcctctttttgctggtagaactgaaagt
gaggctaaccctcgcacggttgaagtctcaagggatgagcagctagcgcgtcagcttgaa
agacaaaacagtcctgctcatccactagccactggtttattccctgctgagatgccaagt
tctgttgaaactgatccttcgaggaatttaggattggatccaagctggctgcagacatgg
tcagaccagggcattgatgtggctggtccctctactaccgcttctaggtccgttggactg
gggagggttcagatgatgatgaggcatcttgcatctgttggggaaagttatgctcaaact
gcacttgacgatgctgcttggagtctttggccgatgaacccttcacaagcttccacttct
actacaacaaccatacctccaggtgctggtggaaggacaggtggtctgcatctaagaact
gtatcaaacgtgacaaatgaaagcttggcaagtatactagctatggccgagacagtgagg
gaagtcatgccacatgtgcctgatgaaattattttccaggacctgcagagaacaaactct
gttgctgttacagtaaacaatcttctccagatgtga
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