Brassica rapa (field mustard): 103834931
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Entry
103834931 CDS
T03449
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103834931
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103834931
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103834931
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103834931
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103834931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103834931
NCBI-ProteinID:
XP_009109272
LinkDB
All DBs
Position
A08:15787581..15789709
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AA seq
243 aa
AA seq
DB search
MADSPNEERDSRSPPPPRKEQPRSRSRSRSRSRSMPRDRSRSRSLPRHVSPSRTRGRSRS
RSRGRSEIENPGTTLYVTGLSTRVTEKDLEAYFSKEGKVASCVLVLEPRTRESRGFAFVT
MDSVKDAERCIKYLNHSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDNDRDSRSSRG
RHYDRDDSGHRRSPPRRDLSPRDHGRRSPRDHGRNSRRDRSYSPRGRSPERRSERRYQPR
GSR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcccaacgaagaaagggactcacgatctcctcctccaccccgaaaagaa
caaccaagatctaggtctaggtccaggtccaggtccaggtccatgccgagagataggtct
aggtcaagatctttaccaaggcatgtatctccatcaagaacccgtggaaggtcgaggtca
agaagccgtggaaggtctgaaattgaaaaccctggtaccactctctatgtgaccggctta
tccacaagagtcacagaaaaggatcttgaagcttatttctccaaggaaggaaaggttgcg
tcctgcgttctagtgctggagccgcgcacccgcgagtctcgtggttttgcctttgtcacg
atggatagtgttaaggacgctgagcggtgcattaagtatctcaaccattctgtactagaa
ggccgatacataactgtcgaaaggtcccgaagaaagcgcccgagaactcccaccccaggc
cactatcttggcttaaaaagctccagagacaatgaccgagatagccgtagcagtcgaggg
aggcactacgatcgtgatgattctggacaccgtaggtcaccaccaagacgcgacttatca
cctcgtgatcatggaaggaggtcacctcgtgatcatggaagaaactctagaagagatcgg
tcttactctcctcgtggaagaagcccagagagaaggtccgagagaaggtatcaacctcgt
ggctcgagatga
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