Brassica rapa (field mustard): 103835125
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Entry
103835125 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103835125
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103835125
04121 Ubiquitin system [BR:
brp04121
]
103835125
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103835125
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103835125
Membrane trafficking [BR:
brp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
103835125
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103835125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Nitr_red_bet_C
Motif
Other DBs
NCBI-GeneID:
103835125
NCBI-ProteinID:
XP_009109473
UniProt:
M4D2I7
LinkDB
All DBs
Position
A08:complement(16855976..16861698)
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AA seq
485 aa
AA seq
DB search
MVPRRVSDTKAIVRILTQTFRASQLSVASLLGVAGFLYALKSGRFRNLNLLFSGTRQDDE
DDDDDDDDAMLVPGLQNLGNNCFLNVILQALASCKDFRSYLQWVLDDASETDEQFPLTLA
LSDLLQELCTAGRRQSVSSPRQVMLALTHYVRNFNLTCQQDAAEALLHLISSLQEEIVVC
YRPTKTSNLSDIMFSRNLRMVAAPSEEGLNDLKRWHKHLRGPFDGILGSTLMCRTCSSQI
SLEFQFFHTLPLSPLLYSGSSNIVLGCTLENCLKKFLGAEKVENYFCHRCWHVAAVKYSS
AMRAAETDIEKIKNCGGDDKCDCKASHHLQRMPWSNSYSFILKQLTIARFPKLLCVQVQR
ASLNMFGESVKLSGHVAFPLVLDLSLFSQSSIGLNIEKNEVSQYLNPEASSRNHGGMYRL
VTVVEHFGMTGSGHYTVYRSVRVASQEDADCEESRWFSISDSEVGRVSESDVLGAEASLL
FYEKL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggttcctcgtcgagtttccgacacaaaggcgattgtccgtatcctcacccaaacattc
agggcttcgcagctgtccgtcgcctctctactcggagtagctggcttcttatacgcccta
aagtccggtagattccgcaacctaaatctcttattctccggtacaagacaagacgacgaa
gatgatgatgatgatgatgatgatgctatgctcgtaccgggccttcaaaatctcggcaac
aattgcttcctcaacgtcatccttcaggctctcgcgagctgcaaagactttcggagttat
cttcaatgggttttagatgatgcgagtgaaactgatgaacagttccctcttacgcttgct
ttgtctgatttattacaagagctctgcacagctgggagaagacaatctgtatctagtcct
cgtcaagtcatgctggcattgactcattatgtcagaaatttcaatttgacatgccaacag
gacgcagcagaagctcttcttcatctaatatcttctttgcaagaagagattgttgtttgc
tatcgtcctaccaaaactagtaatctttcggatataatgttttctcgcaacttgaggatg
gttgctgcgcctagtgaagaaggtctcaatgatttgaagagatggcataaacatttgcgt
ggaccgttcgatgggattcttggtagtacgttgatgtgtcgaacttgttcttctcagatt
tcgttggagtttcagtttttccatacgttgcctctttctcctctgctatatagtggtagt
tccaacattgtgttgggatgcactttggagaattgcttgaagaagtttcttggcgcggag
aaagtggaaaactacttctgccatagatgctggcacgttgctgctgtgaaatattcatct
gcgatgagagcagctgagacagatatcgaaaagatcaagaactgtggtggagacgacaaa
tgtgactgtaaagcttctcatcatcttcagagaatgccatggtcaaacagctattccttt
atattaaagcaattaaccattgcccgtttcccaaagcttctatgcgttcaagtgcaacgt
gcttcattgaacatgtttggagagtcggtcaagctatcgggacatgtcgctttcccgctt
gtcttggacctctccttattttcacagtcttcaataggattaaacatagaaaagaatgag
gtgtcacagtacttaaatcctgaagcatcatcaagaaaccatggtggcatgtataggctt
gtgacagtggtggaacattttggtatgaccggaagcggacactatactgtttatagaagt
gtgagagtagcatcacaagaagatgcagattgtgaggaatcgaggtggttcagtatatct
gattcagaagttggcagagtatcggagagtgatgttcttggtgctgaagctagcctgctc
ttctatgagaagctttaa
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integrated database retrieval system
