Brassica rapa (field mustard): 103835159
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Entry
103835159 CDS
T03449
Name
(RefSeq) RNA-binding protein SGN1
KO
K14396
polyadenylate-binding protein 2
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103835159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103835159
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103835159
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DTHCT
Motif
Other DBs
NCBI-GeneID:
103835159
NCBI-ProteinID:
XP_009109521
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All DBs
Position
A08:complement(16993217..16995369)
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AA seq
269 aa
AA seq
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MDKKEDKREIVTTPEIRLGDTEILETPKNQQKDKKRRKKVHQDALLKPKKLQKHKLCKKK
QKKVAATTEPSEINSDDPEALVKPQKPKRLKKIVDELSNRLDEMTEIVKKLKKNSDLLEE
ENNNTPKEKVVDHECYFESEDADFKNRRTIFVLGFDCSFPRDEIKRTLIKHFSSCGAVSR
VYIPFHCDTGSPMGFAFISMGNPDKALTLNGSYLDGMRLEVTMATKRSEYYGYTNHRGCQ
RCGIASAKRLAKRFYDRTRIRIPLVPSDF
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaggaggacaagcgcgagattgtaacaaccccggagataaggttgggtgat
acagagatcttagaaacgcctaaaaaccagcagaaagacaagaagcggcggaagaaggtt
catcaagatgccttattgaagccaaagaagctgcagaaacacaagttgtgtaagaagaag
cagaaaaaggttgcggcaaccacagagccttcagagataaattctgatgatccagaggct
ttagtaaagcctcagaagccgaaaaggctcaagaagatagtagatgaattaagtaaccgt
ctggacgagatgactgaaattgtcaaaaaactaaagaagaattcagatctactggaagag
gagaataataacactccaaaggaaaaggtggtagaccatgagtgctatttcgaatctgaa
gatgcagattttaaaaaccggcgaacaattttcgttctgggattcgattgttcctttcct
agggatgaaataaagagaacattgattaaacacttcagttcttgtggagcggtctcaagg
gtttatattccttttcattgtgatactggctctcccatgggttttgccttcattagtatg
ggaaatccagataaggctttaacactcaatggaagttacttggatgggatgagacttgag
gttacaatggctacaaagagaagtgaatactatggctataccaaccatcgtggctgtcaa
cgttgtggtattgcttcagcgaagcggttggcgaaacgcttctacgatcgtaccagaata
cgaatcccgttagtgcctagcgatttctag
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