Brassica rapa (field mustard): 103835316
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Entry
103835316 CDS
T03449
Name
(RefSeq) syntaxin-61
KO
K08500
syntaxin of plants SYP6
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103835316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103835316
Membrane trafficking [BR:
brp04131
]
SNARE
SNAP-25[C] (Qc)
STX6
103835316
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
Uso1_p115_C
YqbF_HeH
DUF3394
CCDC-167
Malic_M
PIN-TPR-GreABC
Motif
Other DBs
NCBI-GeneID:
103835316
NCBI-ProteinID:
XP_009109711
UniProt:
M4D313
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All DBs
Position
A08:complement(17709704..17711518)
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AA seq
245 aa
AA seq
DB search
MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERVSPGMGDQVHVTKELLANCGSIEWQVDEL
EKAVAVAAKDPALYGIDDAELERRRRWTSNARTQVRNVKTGVLAGKGSAGAGNASEVRRE
LMRMPNSNEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVERIGGVGLTI
HDELVAQERIIDELGTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV
LVFLT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagcgcaagatccattctacattgttaaggaggagatccaagattctattgat
aagttgcaatctacattccacaaatgggagcgtgtctctcctggaatgggtgatcaagtc
cacgtcaccaaggagcttcttgctaattgtggaagcattgagtggcaggtagatgagctg
gaaaaagcggtggccgttgcagcaaaagatcctgccttgtatggcattgatgatgctgag
cttgaaagacggaggagatggactagtaatgctaggacacaggtgcggaatgtgaagact
ggtgttctagctggtaaaggtagcgctggagctggtaatgcaagtgaagtgcgccgagag
ctgatgagaatgccaaactcgaatgaagcaagtagatacgatcagtatgggggaagagat
gatgatggatttgtacagtcagaatcagataggcaaatgctgttgataaagcaacaagac
gaagagctggacgagctgagtaaaagtgtagagaggattggaggagtgggacttactata
cacgatgaactcgttgcacaggagaggataatagatgaactgggaacggagatggacagt
acaaagaacaggctagagtttgtacagaaaaaagtgggaatggtgatgaagaaagcagga
gcgaaagggcagatgatgatgatatgtttcttgctcgtcttgttcatcatccttttcgtt
ctcgtcttcttgacctaa
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