KEGG   Brassica rapa (field mustard): 103835472
Entry
103835472         CDS       T03449                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:brp03019]
    103835472
Messenger RNA biogenesis [BR:brp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103835472
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 103835472
NCBI-ProteinID: XP_009109901
UniProt: M4D3F5
LinkDB
Position
A08:complement(18467527..18470759)
AA seq 597 aa
MATDNTGAKSSSSSADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLQNVRSFGTEGR
KKDGPQVPPSEKVYEYILFRGTDIKDLQVKASPPVQPPAPPTLNNDPAIIQSHYPSPIPT
SSGLPPAVSSSMPDISSHNGQPGQHGMGFQNSMPLYQPGGNLAPWGASPQPPMYWQGYYT
PPPNGLPQLHQQSLIRPPHGLPMPGSLPQPIPYPNFNAPQPTGSSNLQGSSLPEPPSSLF
PYSSSSQALAPSSLPFTGLPMTMSSGLQSTLQSAPSPSLASEMAPPLFSNKAPIAAPPTL
PQDTNLLPFSLPTTRATDTSAGFSLVTDPISVPQTTPLASAPDSEVSSSISQDKPKPLLV
TPGQLLQSGSASVSLSPPSNNAGKDDEVVQVSSSAALEQSAPVTSEAQPPILPLPSSARP
THKPNGHSFPTHNGYRGRGRGRGRGTGRSHQVMKFTEDFDFTAMNEKFNKDEVWGHLGKS
TNGDGDDDFPIVDEPEAPKVEVKPVYNKDDFFDSLSSNSGDRDSQNARPRFSELRKLDTE
TFGEFSRFRGGRGGRGGYGRNGHSRGGYGGRGYGGYNGRGGGGGGYGYGGRGQGRGV
NT seq 1794 nt   +upstreamnt  +downstreamnt
atggcgactgataacacgggcgcgaaatcgagctcctcctcggcagattcttacgtaggg
agcttgattagtttgacttccaagagcgagatcagatacgaaggcatcctttacaacatc
aacaccgatgaatccagtatcggacttcaaaacgtccgatcatttggaactgaaggaagg
aaaaaagatggtcctcaagttcctccaagtgagaaagtttatgagtacatattgttccgt
ggaaccgatatcaaggatttgcaagtcaaagcctctccaccagttcagcctccagctcca
cctaccttaaacaatgatcctgctataattcagtctcattatcctagcccgatcccaaca
tctagtggcttgcctcccgccgtgagcagttcaatgcctgacattagttctcataatgga
caacctgggcagcatgggatgggattccaaaactcaatgcctttgtatcagcctggtgga
aatcttgctccctggggagcctcacctcaaccaccaatgtattggcaaggatactacacc
ccacctcccaatggccttccccagttgcatcaacagtctttgattcggcctcctcatggg
ctgcctatgcccggttccctgccgcaacccattccgtatcctaactttaatgctcctcaa
cctacagggtcatcaaatttgcagggctcaagcttgccggaaccaccttcgtcactgttt
ccttatagtagcagttctcaagctctggcacccagttctttgccttttactggtttacct
atgacgatgtcttcaggcctgcaatcaacactgcagtcagcaccatctccttccctagct
tcagagatggcacctcctttgttttcgaacaaggctcctattgctgcacctcctacccta
cctcaggatactaatttgcttcccttttctctaccaactactagagccactgatacaagt
gctggcttttcactagtgactgatccgatatctgtgccacagacgacaccattagcatct
gctcctgattctgaagtttctagttccatcagccaagataagccaaaacctttgttggtt
actcctggccaactgttgcagtctggatctgcgtcagtctctttgtccccaccctctaac
aacgctggtaaagatgatgaggtggttcaagtatcatcatcagctgctttggaacaatct
gctccagttacatcagaagcccaacccccaatactgccattgccttcctctgcaaggcca
actcataagccaaacgggcattccttcccaacccataatggttacaggggacgtgggaga
ggaaggggaagaggaacagggcgatcacaccaggtaatgaagttcactgaagattttgac
ttcacggcgatgaatgaaaagttcaataaggatgaagtatggggtcatcttgggaagagc
accaatggtgatggtgatgatgatttcccgatcgtagatgaacctgaggcgcctaaggtc
gaggtcaaacctgtttacaacaaagacgactttttcgatagcctatcatcaaactccggc
gacagagattcccaaaatgcaaggcctaggttctcagagctacgtaaactagatactgag
acatttggtgagttctcaagattcagaggaggccgaggaggtcgtggtggttatggtaga
aacggtcactcacgtggtggttatggtggtcgtggctatggcggctataatgggcgcggt
ggtggtggtggaggctacgggtatggtggtcgtggccaagggagaggcgtgtga

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