KEGG   Brassica rapa (field mustard): 103835748
Entry
103835748         CDS       T03449                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
brp  Brassica rapa (field mustard)
Pathway
brp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103835748
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:brp04121]
    103835748
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     103835748
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like F-box LRR_NXF1-5 LRR_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 103835748
NCBI-ProteinID: XP_009110186
LinkDB
Position
A08:complement(19342962..19345466)
AA seq 362 aa
MVMVVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLMRILSLVDDRNVIAASGVCCG
WRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCH
ELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDKAIAYLTRSCRNLKVLNLC
GCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITD
ESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSSAKKSKFDEEGLR
SLNISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAVPHS
AH
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggtgatggtagtaggagaaacatccatggagctagaccagtgttttcagatgatgatg
atgaagatggaaggagtctcgatcaaagagtggaaagacatccctgttgagcttctcatg
agaatcctctcccttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggt
tggagagatgccatctctcttggtctcactcgtctccgtctctcttggtgcaacaacaac
atgaacagcttggttctttctcttgctcccaagtttgtaaagctgcaaactttaatactg
cgccaagacaaaccccaactagaggacaatgcggtggaggccatagcaaatcactgccat
gagctacaagagcttgatctcagcaaaagcttgaaactcactgaccgttccctctacgca
cttgctcatggttgccccaacctcacaaaactcaaccttagcggctgcacttcgttcagc
gacaaagctattgcgtatctgaccaggtcctgcagaaacctgaaagttctgaatctttgt
ggatgtgtcaacgctgtttctgactataccttggaggctattgggaacaactgcaaccag
atgcagtcactaaacttgggatggtgtgagaagatcagtgatgatggggttatgagttta
gcttatggctgtcctgatctcaggaccctggacttgtgtggttgtgttctcattacagat
gagagtgtggtagctttagctgattggtgcgtccacttgagatcactggggctatactac
tgcagaaacataacggacagagccatgtactcgctagctcaaagcggggtgaagaacaaa
ccaggggggcaatggaaatcatcagctaagaagagcaaattcgacgaagaaggcctgagg
agtctcaacataagccagtgcactgcacttacaccttcggctgttcaagcggtctgcgat
acgtttcctgctcttcacacgtgttcggggagacattcgcttgtgatgagcgggtgtttg
aacttgacgtctgtgcactgtgcttgtatccttcaggctcatcgcgcggttcctcactct
gctcactga

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