Brassica rapa (field mustard): 103835748
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Entry
103835748 CDS
T03449
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103835748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103835748
Ubiquitin system [BR:
brp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103835748
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
103835748
NCBI-ProteinID:
XP_009110186
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Position
A08:complement(19342962..19345466)
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AA seq
362 aa
AA seq
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MVMVVGETSMELDQCFQMMMMKMEGVSIKEWKDIPVELLMRILSLVDDRNVIAASGVCCG
WRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCH
ELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDKAIAYLTRSCRNLKVLNLC
GCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITD
ESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSSAKKSKFDEEGLR
SLNISQCTALTPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRAVPHS
AH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggtagtaggagaaacatccatggagctagaccagtgttttcagatgatgatg
atgaagatggaaggagtctcgatcaaagagtggaaagacatccctgttgagcttctcatg
agaatcctctcccttgttgatgatcggaatgtcattgctgcttctggtgtttgctgtggt
tggagagatgccatctctcttggtctcactcgtctccgtctctcttggtgcaacaacaac
atgaacagcttggttctttctcttgctcccaagtttgtaaagctgcaaactttaatactg
cgccaagacaaaccccaactagaggacaatgcggtggaggccatagcaaatcactgccat
gagctacaagagcttgatctcagcaaaagcttgaaactcactgaccgttccctctacgca
cttgctcatggttgccccaacctcacaaaactcaaccttagcggctgcacttcgttcagc
gacaaagctattgcgtatctgaccaggtcctgcagaaacctgaaagttctgaatctttgt
ggatgtgtcaacgctgtttctgactataccttggaggctattgggaacaactgcaaccag
atgcagtcactaaacttgggatggtgtgagaagatcagtgatgatggggttatgagttta
gcttatggctgtcctgatctcaggaccctggacttgtgtggttgtgttctcattacagat
gagagtgtggtagctttagctgattggtgcgtccacttgagatcactggggctatactac
tgcagaaacataacggacagagccatgtactcgctagctcaaagcggggtgaagaacaaa
ccaggggggcaatggaaatcatcagctaagaagagcaaattcgacgaagaaggcctgagg
agtctcaacataagccagtgcactgcacttacaccttcggctgttcaagcggtctgcgat
acgtttcctgctcttcacacgtgttcggggagacattcgcttgtgatgagcgggtgtttg
aacttgacgtctgtgcactgtgcttgtatccttcaggctcatcgcgcggttcctcactct
gctcactga
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integrated database retrieval system